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Protein Overview: gi|15230522, gi|...

General Information:
Name(s) found: gi|6572077 [NCBI NR]
gi|15230522 [NCBI NR]
gi|11357257 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|6572077|emb|CAB63020.1| disease resistance-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230522|ref|NP_190724.1| ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] [NCBI NR]
  • pir||T45787 disease resistance-like protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1253 amino acids

    Gene Ontology:
    Cellular Component: intrinsic to membrane [IEA]
    Biological Process: signal transduction [IEA]
    innate immune response [IEA]
    apoptosis [IEA]
    defense response [ISS]
    Molecular Function: ATP binding [IEA]
    protein binding [IEA]
    transmembrane receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDCSDVYIS FDRSEDTVRY SFVSHLCAAF RRRGISSFIR ENGSDSESNG FSKLETSRAS  60
   61 VVVFSEKYSS SKSCMEELVK VSERRRKNCL AVVPVFYPVT KSFMKKQIWN LGDVRSDWPS 120
  121 ALLETVDLPG HELYDTQSDS DFVEEIVADV REKLNMSDNI GIYSKLGKIE TLIYKQPWGV 180
  181 RSIGIWGMPG IGKTTLAKAA FDQLSGDYEA SCFIKDFNKA FHEKGLYGLL EAHFGKILRE 240
  241 ELGIKSSITR PILLRNVLRH KRVLVVLDDV CKPLDAESFL GGFDWFCPGS LIIITSRDKQ 300
  301 VFSICRVDQI YEVPGLNEEE ALQLFSRCAF GKEIIHESLQ KLSKKVIDYA NGNPLALIFF 360
  361 GCMSRKNPKP IEIAFPKVKK YLAHEIHDAV KSTYDSLSSN EKNIFLDIAC LFRGENVDCV 420
  421 IHLLEGCGFF PRVEINVLVE KCLVSMAEGR VVMHNLIQSI GRKIINGGKR RSRLWKPLII 480
  481 KYFLEDRQVL GSEDIEAIFL DPSALSFDVN PMAFENMYNL RYLKICSSNP GNHYALHLPK 540
  541 GVKSLPEELR LLHWEHFPLL SLPQDFNTRN LVILNMCYSK LQRLWEGTKE LGMLKRIMLC 600
  601 HSQQLVGIQE LQIALNMEVI DLQGCARLQR FLATGHFQHL RVINLSGCIK IKSFPEVPPN 660
  661 IEELYLKQTG IRSIPTVTFS PQDNSFIYDH KDHKFLNREV SSDSQSLSIM VYLDNLKVLD 720
  721 LSQCLELEDI QGIPKNLRKL YLGGTAIKEL PSLMHLSELV VLDLENCKRL HKLPMGIGNL 780
  781 SSLAVLNLSG CSELEDIQGI PRNLEELYLA GTAIQEVTSL IKHLSELVVL DLQNCKRLQH 840
  841 LPMEISNLKS LVTLKLTDPS GMSIREVSTS IIQNGISEIG ISNLNYLLLT FNENAEQRRE 900
  901 YLPRPRLPSS SLHGLVPRFY ALVSLSLFNA SLMHIPEEIC SLPSVVLLDL GRNGFSKIPE 960
  961 SIKQLSKLHS LRLRHCRNLI LLPALPQSLK LLNVHGCVSL ESVSWGFEQF PSHYTFSDCF1020
 1021 NKSPKVARKR VVKGLAKVAS IGNEHQQELI KALAFSICGP AGADQATSYN LRAGSFATIE1080
 1081 ITPSLRKTLL GFAIFVVVSF SDDSHNNAGL GVRCVSRWKT KKRVVTGKAE KVFRCWAPRE1140
 1141 APEVQRDHMF VFYEDAEMHR GGGEGNKPNI MADHVEFEFQ AVNGRNKVLG GNCMVTECDV1200
 1201 CVITAATGAA SLSVTNASKD MSLSKNHSPK LSSVIGKLRF KRVGRFGGCV CLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] FFAS03 3.81 Toll-like receptor 1, TLR1
    2 View Details [156..563] PSI-BLAST 7.69897 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [564..1132] PSI-BLAST 27.69897 The molecular structure of toll-like receptor 3 ligand binding domain
    4 View Details [1133..1253] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.166909062418251 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle