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Protein Overview: FDL10_ARATH

General Information:
Name(s) found: FDL10_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75268062|sp|Q9ZV93.1|FDL10_ARATH RecName: Full=Putative F-box/FBD/LRR-repeat protein At1g78750 [NCBI NR]
  • gi|3834319|gb|AAC83035.1| Similar to gi|2244754 heat shock transcription factor HSF30 homolog from Arabidopsis thaliana chromosome 4 contig gb|Z97335 [NCBI NR]
  • pir||E96816 hypothetical protein F9K20.21 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219161|ref|NP_177996.1| F-box family protein [Arabidopsis thaliana] [NCBI NR]
  • F-box/FBD/LRR-repeat protein At1g78750 OS=Arabidopsis thaliana GN=At1g78750 PE=2 SV=1 [Swiss-Prot]
  • (Q9ZV93) F9K20.21 protein [athaliana3702.FASTAC.txt]
  • Similar to gi|2244754 heat shock transcription factor HSF30 homolog from Arabidopsis thaliana chromosome 4 contig gb|Z97335gi|25406566|pir||E96816 hypothetical protein F9K20.21 [imported] - Arabidopsis thalianagi|15219161|ref|NP_177996.1| F-box family p [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 F-box family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | F-box family protein | chr1:29618015-29619588 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Similar to gi|2244754 heat shock transcription factor HSF30 homolog from Arabidopsis thaliana chromosome 4 contig gb|Z97335 [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | F-box/RNI-like superfamily protein | chr1:29613122-29614695 REVERSE LENGTH=458 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGAGEKRVR AKGSREVDWI SNLPETLLCQ VLFYLPTKDV VKSSVLSSRW RNLWKYVPGF  60
   61 NLSYCDFHVR NTFSYDHNTF LRFVDSFMGF NSQSCLQSFR LEYDSSGYGE PKLALIRRWI 120
  121 NSVVSRKVKY LGVLDDSCDN YEFEMPPTLY TCETLVYLTL DGLSLASPKF VSLPSLKELH 180
  181 LSIVKFADHM ALETLISQCP VLENLNINRS FCDDFEFTCV RSQSLLSFTH VADTDEMLNE 240
  241 DLVVAIDAPK LKYLRLSDHR IASFILNDLA SLVEADIDTV FNLICKKMFN PNDLNKRNMI 300
  301 RDFLVGISSI KTLIIASSTL EVIYDYSRCE PLPLFRNLSS LRVDFYGYKW EMLPIFLESC 360
  361 PNLKSLVVGS ANYREKEGIN ILSVPRGFLS SLEYVKIERP LKGEAMEMKL VSYLLENSTI 420
  421 LKKLTLCLDD SIKKEESVIL KELNTIPRLS SACQVVIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..458] PSI-BLAST 14.39794 No description for 2p1mB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle