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Protein Overview: RIR2C_ARATH

General Information:
Name(s) found: RIR2C_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana GN=TSO2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 332 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: DNA repair [TAS]
    multicellular organismal development [IMP]
    DNA replication [IMP]
    deoxyribonucleoside diphosphate metabolic process [ISS]
    regulation of cell cycle [IMP]
    programmed cell death [IMP]
    Molecular Function: transition metal ion binding [IEA]
    ribonucleoside-diphosphate reductase activity [IEA][ISS]
    oxidoreductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSMPEEPLL TPTPDRFCMF PIHYPQIWEM YKKAEASFWT AEEVDLSQDN RDWENSLNDG  60
   61 ERHFIKHVLA FFAASDGIVL ENLASRFMSD VQVSEARAFY GFQIAIENIH SEMYSLLLDT 120
  121 YIKDNKERDH LFRAIETIPC VAKKAQWAMK WIDGSQTFAE RIIAFACVEG IFFSGSFCSI 180
  181 FWLKKRGLMP GLTFSNELIS RDEGLHCDFA CLLYTLLKTK LSEERVKSIV CDAVEIEREF 240
  241 VCDALPCALV GMNRDLMSQY IEFVADRLLG ALGYGKVYGV TNPFDWMELI SLQGKTNFFE 300
  301 KRVGDYQKAS VMSSVNGNGA FDNHVFSLDE DF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..332] PSI-BLAST 112.0 Ribonucleotide reductase R2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
    		•  12.7205287868529 bayes_pls_golite062009
  • ribonucleoside-diphosphate reductase activity
    		•  12.6679910771829 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups
    		•  12.0783326936172 bayes_pls_golite062009
  • class I ribonucleotide reductase activity
    		•  7.27682621818194 bayes_pls_golite062009
  • binding
    		•  2.38747290927526 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.65619019230429 bayes_pls_golite062009
  • DNA binding
    		•  1.60520679245579 bayes_pls_golite062009
  • protein binding
    		•  1.35559475972187 bayes_pls_golite062009
  • ion binding
    		•  0.214820110894452 bayes_pls_golite062009
  • cation binding
    		•  0.203880627974907 bayes_pls_golite062009
  • metal ion binding
    		•  0.203880627974907 bayes_pls_golite062009
  • catalytic activity
    		•  0.197328811494233 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.168785605665701 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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