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Protein Overview: SYLM_ARATH

General Information:
Name(s) found: SYLM_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|7267192|emb|CAB77903.1| putative leucyl tRNA synthetase [Arabidopsis thaliana] [NCBI NR]
  • gi|4982478|gb|AAD36946.1|AF069441_6 putative leucyl tRNA synthetase [Arabidopsis thaliana] [NCBI NR]
  • pir||A85055 probable leucyl tRNA synthetase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|25090241|gb|AAN72260.1| At4g04350/T19B17_7 [Arabidopsis thaliana] [NCBI NR]
  • gi|19310531|gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana] [NCBI NR]
  • gi|15233478|ref|NP_192344.1| EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide binding [Arabidopsis thaliana] [NCBI NR]
  • Leucine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=EMB2369 PE=2 SV=1 [Swiss-Prot]
  • (Q9XEA0) Putative leucyl tRNA synthetase (AT4g04350/T19B17_7) [athaliana3702.FASTAC.txt]
  • putative leucyl tRNA synthetase [Arabidopsis thaliana]gi|19310531|gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana]gi|25090241|gb|AAN72260.1| At4g04350/T19B17_7 [Arabidopsis thaliana]gi|4982478|gb|AAD36946.1| putative leucyl tRNA synthetase [Ara [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Leucyl-tRNA synthetase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: EMB2369 | EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase | chr4:2128127-2133028 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative leucyl tRNA synthetase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT4g04350/T19B17_7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • EMB2369; ATP binding / leucine-tRNA ligase/ tRNA ligase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g04350/T19B17_7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: EMB2369 | tRNA synthetase class I (I, L, M and V) family protein | chr4:2128129-2133030 FORWARD LENGTH=973 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT4g04350/T19B17_7 OS=Arabidopsis thaliana GN=T19B17.7 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 973 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrion [IDA]
    Biological Process: tRNA aminoacylation for protein translation [ISS]
    embryonic development ending in seed dormancy [IMP][NAS]
    Molecular Function: nucleotide binding [IEA]
    ATP binding [IEA][ISS]
    aminoacyl-tRNA ligase activity [IEA][ISS]
    leucine-tRNA ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSHHQILQI RSDPFVLSHC CRHTRLTSSL TLQSPLKQPF SCLPFRWRRS YRGGVRSSTT  60
   61 ETHGSKKEAL VSETATTSIE LKRVYPFHEI EPKWQRYWED NRIFRTPDDV DTSKPKFYVL 120
  121 DMFPYPSGAG LHVGHPLGYT ATDILARLRR MQGYNVLHPM GWDAFGLPAE QYAIETGTHP 180
  181 KTTTLKNIDR FRLQLKSLGF SYDWDRELST TEPDYYKWTQ WIFLQLYKKG LAYQAEVPVN 240
  241 WCPALGTVLA NEEVVDGVSE RGGHPVIRKP MRQWMLKITA YADRLLEDLD ELEWPESIKE 300
  301 MQRNWIGRSE GAELNFSILD GEGRETDKEI TVYTTRPDTL FGATYMVVAP EHQLLSYFVT 360
  361 AEQKQQVEEY KDFASRKSDL ERTELQKDKT GVFTGCYAKN PANGDAIPIW VADYVLASYG 420
  421 TGAIMAVPAH DTRDNEFALK YNIPIKWVVR NEANSSDDAK QVYPGLGIIE NSSTLETGLD 480
  481 INQLSSKEAA LKVIEWAERT GNGKKKVNYK LRDWLFARQR YWGEPIPILI LDESGETIAI 540
  541 SESELPLTLP ELNDFTPTGT GEPPLSKAVS WVNTVDPSTG KPAKRETSTM PQWAGSCWYY 600
  601 LRFMDPKNPE ALVDKEKEKY WSPVDVYVGG AEHAVLHLLY SRFWHKVLYD IGVVSTKEPF 660
  661 KCVINQGIIL GEVQYTAWKD QEGNYVSADT EERLNEHQQV TIPEEKVIKS GDHFVLKEDP 720
  721 SIRLIPRVYK MSKSRGNVVN PDDVVLEYGA DSLRLYEMFM GPFRDSKTWN TSGIEGVHRF 780
  781 LARTWRLVIG LPQSDGSFKD GTLVTDDEPT LEQLRTLHKC IAKVTEEIES TRFNTGISGM 840
  841 MEFVNAAYKW NNQPRGIIEP FVLLLSPYAP HMAEELWSRL GHPNSLAYES FPKANPDYLK 900
  901 NTTIVLPVQI NGKTRGTIEV EEGCSEDDAF VLASQDDKLR KYLDGQSIKK RIYVPGKILN 960
  961 VILDRTNVKV TTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 3.39794 Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
    2 View Details [81..973] PSI-BLAST 1000.0 Leucyl-tRNA synthetase (LeuRS)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle