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Protein Overview: gi|15223094, gi|...

General Information:
Name(s) found: gi|5080788 [NCBI NR]
gi|25285708 [NCBI NR]
gi|24030341 [NCBI NR]
gi|21553384 [NCBI NR]
gi|15223094 [NCBI NR]
Description(s) found:
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  • gi|5080788|gb|AAD39298.1|AC007576_21 Very similar to adventitious rooting related oxygenase [Arabidopsis thaliana] [NCBI NR]
  • pir||F86274 hypothetical protein F7A19.20 - Arabidopsis thaliana [NCBI NR]
  • gi|24030341|gb|AAN41336.1| putative dioxygenase [Arabidopsis thaliana] [NCBI NR]
  • gi|21553384|gb|AAM62477.1| dioxygenase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15223094|ref|NP_172864.1| 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9XI76) F7A19.20 protein (Dioxygenase-like protein) [athaliana3702.FASTAC.txt]
  • Very similar to adventitious rooting related oxygenase [Arabidopsis thaliana]gi|24030341|gb|AAN41336.1| putative dioxygenase [Arabidopsis thaliana]gi|21553384|gb|AAM62477.1| dioxygenase-like protein [Arabidopsis thaliana]gi|15223094|ref|NP_172864.1| 2- [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 2-oxoglutarate-dependent dioxygenase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 2-oxoglutarate-dependent dioxygenase, putative | chr1:4833645-4834830 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Very similar to adventitious rooting related oxygenase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative dioxygenase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • dioxygenase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:4833648-4834833 REVERSE LENGTH=312 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein OS=Arabidopsis thaliana GN=F7A19.20 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 312 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: oxidoreductase activity [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVNGVIPT IDLEEVNDQI LNEKIREASE RWGCFTVINH GVSLSLMAEM KKTVRDLHER  60
   61 PYEMKLRNTD VLLGNGYKPL SEFNPFYESF GLFDMASPQA VNSFCDKLDA SPDQREILLK 120
  121 YAKATDDLAR SLARRLAESY GVVEPNFLRG WPSQFRMNKY HFKPDSVGKL GVILHTDPGF 180
  181 LTILQGDEDV GGLEAMDNSS GSFFPIHTLP NTLLVNLGDM ATIWSNGRLC NVKHRVQCIE 240
  241 AKMRITIASF LLGPVDRDLE APDEFVDAEH PRLYKPISDG GLRKIRLSKH LHAGESLKFI 300
  301 TINELSDVPK ID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..312] PSI-BLAST 80.522879 The structure of ACC oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.391261742890951 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle