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Protein Overview: LRK62_ARATH

General Information:
Name(s) found: LRK62_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • L-type lectin-domain containing receptor kinase VI.2 OS=Arabidopsis thaliana GN=LECRK62 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 682 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IEP]
    Biological Process: abscisic acid mediated signaling pathway [IMP]
    response to abscisic acid stimulus [IEP]
    seed germination [IMP]
    Molecular Function: kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTQRSMFIV SFLFKLFLFL SVHVRAQRTT TNFAFRGFNG NQSKIRIEGA AMIKPDGLLR  60
   61 LTDRKSNVTG TAFYHKPVRL LNRNSTNVTI RSFSTSFVFV IIPSSSSNKG FGFTFTLSPT 120
  121 PYRLNAGSAQ YLGVFNKENN GDPRNHVFAV EFDTVQGSRD DNTDRIGNDI GLNYNSRTSD 180
  181 LQEPVVYYNN DDHNKKEDFQ LESGNPIQAL LEYDGATQML NVTVYPARLG FKPTKPLISQ 240
  241 HVPKLLEIVQ EEMYVGFTAS TGKGQSSAHY VMGWSFSSGG ERPIADVLIL SELPPPPPNK 300
  301 AKKEGLNSQV IVMIVALSAV MLVMLVLLFF FVMYKKRLGQ EETLEDWEID HPRRLRYRDL 360
  361 YVATDGFKKT GIIGTGGFGT VFKGKLPNSD PIAVKKIIPS SRQGVREFVA EIESLGKLRH 420
  421 KNLVNLQGWC KHKNDLLLIY DYIPNGSLDS LLYTVPRRSG AVLSWNARFQ IAKGIASGLL 480
  481 YLHEEWEKIV IHRDVKPSNV LIDSKMNPRL GDFGLARLYE RGTLSETTAL VGTIGYMAPE 540
  541 LSRNGNPSSA SDVFAFGVLL LEIVCGRKPT DSGTFFLVDW VMELHANGEI LSAIDPRLGS 600
  601 GYDGGEARLA LAVGLLCCHQ KPASRPSMRI VLRYLNGEEN VPEIDDEWGY SKSSRSEFGS 660
  661 KLVGYVSSTS ITRVSSTSRI SQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..349] PSI-BLAST 22.522879 Legume lectin
    2 View Details [350..682] PSI-BLAST 69.154902 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.40096962515027 bayes_pls_golite062009
  • protein kinase activity
    		•  1.4419983524192 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.24960126056886 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • signal transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.22297882223243 bayes_pls_golite062009
  • kinase activity
    		•  1.20198110006055 bayes_pls_golite062009
  • receptor activity
    		•  1.19855418474193 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  1.12075545665641 bayes_pls_golite062009
  • transporter activity
    		•  0.883938295782649 bayes_pls_golite062009
  • protein binding
    		•  0.757492117682468 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.698240496790323 bayes_pls_golite062009
  • transferase activity
    		•  0.634621009477606 bayes_pls_golite062009
  • growth factor binding
    		•  0.504567186763321 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  0.50233763591332 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.481025719380392 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  0.418250353742262 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.372701974560119 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.339759264844777 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.248374734969893 bayes_pls_golite062009
  • DNA binding
    		•  0.157628282318248 bayes_pls_golite062009
  • receptor binding
    		•  0.10835499255618 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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