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Protein Overview: EDS1C_ARATH

General Information:
Name(s) found: EDS1C_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Protein EDS1 OS=Arabidopsis thaliana GN=EDS1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 623 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: aerenchyma formation [IMP]
    systemic acquired resistance [IEP]
    response to hypoxia [IMP]
    lipid metabolic process [ISS]
    systemic acquired resistance, salicylic acid mediated signaling pathway [IGI]
    response to singlet oxygen [IGI]
    defense response [ISS]
    plant-type hypersensitive response [IMP]
    regulation of hydrogen peroxide metabolic process [IMP]
    Molecular Function: triglyceride lipase activity [ISS]
    lipase activity [ISS]
    signal transducer activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS  60
   61 FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR TSFQASVEMA VRSRKQIVFT 120
  121 GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV 180
  181 NFVSRFDIVP RIMLARKASV EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA 240
  241 NQAVCELTGS AEAFLETLSS FLELSPYRPA GTFVFSTEKR LVAVNNSDAI LQMLFYTSQA 300
  301 SDEQEWSLIP FRSIRDHHSY EELVQSMGKK LFNHLDGENS IESTLNDLGV STRGRQYVQA 360
  361 ALEEEKKRVE NQKKIIQVIE QERFLKKLAW IEDEYKPKCQ AHKNGYYDSF KVSNEENDFK 420
  421 ANVKRAELAG VFDEVLGLMK KCQLPDEFEG DIDWIKLATR YRRLVEPLDI ANYHRHLKNE 480
  481 DTGPYMKRGR PTRYIYAQRG YEHYILKPNG MIAEDVFWNK VNGLNLGLQL EEIQETLKNS 540
  541 GSECGSCFWA EVEELKGKPY EEVEVRVKTL EGMLGEWITD GEVDDKEIFL EGSTFRKWWI 600
  601 TLPKNHKSHS PLRDYMMDEI TDT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..248] PSI-BLAST 43.69897 Crystal Structure of Ferulic Acid Esterase from Aspergillus niger
    2 View Details [249..441] deduced N/A No confident structure predictions are available.
    3 View Details [442..529] MSA 1.010967 View MSA. No confident structure predictions are available.
    4 View Details [530..623] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle