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Protein Overview: GLO4_ARATH

General Information:
Name(s) found: GLO4_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294638|dbj|BAB02977.1| glycolate oxidase [Arabidopsis thaliana] [NCBI NR]
  • gi|27754229|gb|AAO22568.1| putative glycolate oxidase [Arabidopsis thaliana] [NCBI NR]
  • gi|15231789|ref|NP_188029.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative [Arabidopsis thaliana] [NCBI NR]
  • Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 OS=Arabidopsis thaliana GN=GLO4 PE=2 SV=1 [Swiss-Prot]
  • (Q9LJH5) Glycolate oxidase [athaliana3702.FASTAC.txt]
  • glycolate oxidase [Arabidopsis thaliana]gi|27754229|gb|AAO22568.1| putative glycolate oxidase [Arabidopsis thaliana]gi|15231789|ref|NP_188029.1| (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 (S)-2-hydroxy-acid oxidase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | chr3:4685851-4687859 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative glycolate oxidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • glycolate oxidase/ oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • glycolate oxidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Aldolase-type TIM barrel family protein | chr3:4685844-4687852 REVERSE LENGTH=363 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEA]
    Molecular Function: FMN binding [IEA]
    glycolate oxidase activity [ISS]
    catalytic activity [IEA]
    oxidoreductase activity [IEA]
    electron carrier activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQIVNVDEF QELAKQALPK MYYDFYNGGA EDQHTLNENV QAFRRIMFRP RVLVDVSNID  60
   61 MSTSMLGYPI SAPIMIAPTA MHKLAHPKGE IATAKAAAAC NTIMIVSFMS TCTIEEVASS 120
  121 CNAVRFLQIY VYKRRDVTAQ IVKRAEKAGF KAIVLTVDVP RLGRREADIK NKMISPQLKN 180
  181 FEGLVSTEVR PNEGSGVEAF ASSAFDASLS WKDIEWLRSI TKLPILVKGL LTREDALKAV 240
  241 EAGVDGIVVS NHGARQLDYS PATITVLEEV VHAVKGRIPV LLDGGVRRGT DVFKALALGA 300
  301 QAVLIGRPIV YGLAAKGEDG VKKVIDMLKN EFEITMALSG CPTIDDVTRN HVRTENERIK 360
  361 SML

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] PSI-BLAST 87.522879 THREE-DIMENSIONAL STRUCTURES OF GLYCOLATE OXIDASE WITH BOUND ACTIVE-SITE INHIBITORS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  5.53040931722074 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  4.99876306143789 bayes_pls_golite062009
  • L-lactate dehydrogenase (cytochrome) activity
    		•  4.62364477397179 bayes_pls_golite062009
  • lactate dehydrogenase activity
    		•  4.48836665081946 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor
    		•  4.26416137128289 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.55520438339582 bayes_pls_golite062009
  • 2,4-dienoyl-CoA reductase (NADPH) activity
    		•  2.53740821102118 bayes_pls_golite062009
  • catalytic activity
    		•  1.94749091175302 bayes_pls_golite062009
  • binding
    		•  1.13068993839107 bayes_pls_golite062009
  • (S)-2-hydroxy-acid oxidase activity
    		•  1.08257847863105 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
    		•  0.922853827985629 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  0.449365788564188 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.428925551338656 bayes_pls_golite062009
  • protein binding
    		•  0.174608759343963 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
    		•  0.0276574257865798 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle