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Protein Overview: gi|6715434, gi|2...

General Information:
Name(s) found: gi|6715434 [NCBI NR]
gi|41619172 [NCBI NR]
gi|28950825 [NCBI NR]
gi|26451798 [NCBI NR]
gi|25406346 [NCBI NR]
gi|15221257 [NCBI NR]
gi|12324794 [NCBI NR]
Description(s) found:
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  • gi|6715434|gb|AAF26414.1|AF217205_1 putative transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|41619172|gb|AAS10040.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|28950825|gb|AAO63336.1| At1g74430 [Arabidopsis thaliana] [NCBI NR]
  • gi|26451798|dbj|BAC42993.1| putative transcription factor MYB95 [Arabidopsis thaliana] [NCBI NR]
  • pir||B96773 hypothetical protein F1M20.11 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15221257|ref|NP_177583.1| MYB95 (myb domain protein 95); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|12324794|gb|AAG52356.1|AC011765_8 putative MYB family transcription factor; 31729-33438 [Arabidopsis thaliana] [NCBI NR]
  • (Q9SG63) Putative MYB family transcription factor (Putative transcription factor MYB95) (At1g74430) [athaliana3702.FASTAC.txt]
  • putative transcription factor MYB95 [Arabidopsis thaliana]gi|28950825|gb|AAO63336.1| At1g74430 [Arabidopsis thaliana]gi|6715434|gb|AAF26414.1| putative transcription factor [Arabidopsis thaliana]gi|25406346|pir||B96773 hypothetical protein F1M20.11 [im [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Myb family transcription factor (MYB95) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AtMYB95, AtMYBCP66, MYB95 | MYB95 (myb domain protein 95); DNA binding / transcription factor | chr1:27979070-27980779 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative MYB family transcription factor; 31729-33438 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g74430 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • MYB95; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative transcription factor MYB95 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MYB95, ATMYB95, ATMYBCP66 | myb domain protein 95 | chr1:27975409-27977118 FORWARD LENGTH=271 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g74430 OS=Arabidopsis thaliana GN=F1M20.11 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    response to jasmonic acid stimulus [IEP]
    response to salicylic acid stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRTTWFDVD GLRKGEWTAE EDRKLVVYIN EHGLGEWGSL PKRAGLQRCG KSCRLRWLNY  60
   61 LRPGIKRGKF TPQEEEEIIK YHALLGNRWA AIAKQMPNRT DNDIKNHWNS CLKKRLAKKG 120
  121 IDPMTHEPTT TTSLTVDVTS SSTTSSPTPS PTSSSFSSCS STGSARFLNK LAAGISSRKH 180
  181 GLESIKTVIL AEQPREAVDE EKMMTINMKE KELISCYMEI DETMSIDELP CDDSTSGFVA 240
  241 FDDYSLIDPY RDGVYVSDFY DETEHLDLFL L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 34.0 CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES
    2 View Details [113..271] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle