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Protein Overview: gi|12323541, gi|...

General Information:
Name(s) found: gi|28466825 [NCBI NR]
gi|25350261 [NCBI NR]
gi|15220508 [NCBI NR]
gi|12323541 [NCBI NR]
gi|110743019 [NCBI NR]
Description(s) found:
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  • gi|28466825|gb|AAO44021.1| At1g29640 [Arabidopsis thaliana] [NCBI NR]
  • pir||F86419 hypothetical protein F15D2.20 - Arabidopsis thaliana [NCBI NR]
  • gi|15220508|ref|NP_174257.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12323541|gb|AAG51753.1|AC068667_32 hypothetical protein; 98808-98386 [Arabidopsis thaliana] [NCBI NR]
  • gi|110743019|dbj|BAE99402.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9C7N7) Hypothetical protein (At1g29640) [athaliana3702.FASTAC.txt]
  • At1g29640 [Arabidopsis thaliana]gi|12323541|gb|AAG51753.1| hypothetical protein; 98808-98386 [Arabidopsis thaliana]gi|25350261|pir||F86419 hypothetical protein F15D2.20 - Arabidopsis thalianagi|15220508|ref|NP_174257.1| expressed protein [Arabidopsis t [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G34340.1); similar to unknown [Cucumis melo] (GB:ABQ53634.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) | chr1:10355945-10356367 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g29640 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein; 98808-98386 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Protein of unknown function, DUF584 | chr1:10355959-10356381 REVERSE LENGTH=140 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g29640 OS=Arabidopsis thaliana GN=F15D2.20 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 140 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEFDESEI IFSDNYFPIR RREDGNEKEN NRPVDFRENS ERVWNKSSRR SKTTPLPSAV  60
   61 TAFSSSLPVN IPMRRYSTEE EYSDDDGGRK MIPPHLIVGR RMEGGQMAFS VCTGNGRTLK 120
  121 GRDLSRVRNS VLKLTGFLEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] Pfam 70.886057 No description for PF04520.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle