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Protein Overview: PDCB3_ARATH

General Information:
Name(s) found: PDCB3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9795591|gb|AAF98409.1|AC026238_1 Hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30017221|gb|AAP12844.1| At1g18650 [Arabidopsis thaliana] [NCBI NR]
  • pir||C86320 hypothetical protein F25I16.1 - Arabidopsis thaliana [NCBI NR]
  • gi|21592752|gb|AAM64701.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18394637|ref|NP_564059.1| PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding [Arabidopsis thaliana] [NCBI NR]
  • gi|110736436|dbj|BAF00186.1| predicted GPI-anchored protein [Arabidopsis thaliana] [NCBI NR]
  • PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana GN=PDCB3 PE=1 SV=1 [Swiss-Prot]
  • (Q9FZ86) F25I16.1 protein (Hypothetical protein) (At1g18650) [athaliana3702.FASTAC.txt]
  • Hypothetical protein [Arabidopsis thaliana]gi|30017221|gb|AAP12844.1| At1g18650 [Arabidopsis thaliana]gi|21592752|gb|AAM64701.1| unknown [Arabidopsis thaliana]gi|25518423|pir||C86320 hypothetical protein F25I16.1 - Arabidopsis thalianagi|18394637|ref| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Glycosyl hydrolase family protein 17 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | glycosyl hydrolase family protein 17 | chr1:6419028-6420405 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • predicted GPI-anchored protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g18650 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PDCB3 | plasmodesmata callose-binding protein 3 | chr1:6419036-6420413 REVERSE LENGTH=184 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g18650 OS=Arabidopsis thaliana GN=F25I16.1 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 184 amino acids

    Gene Ontology:
    Cellular Component: plasmodesma [IDA]
    anchored to membrane [TAS]
    Biological Process: biological_process [ND]
    Molecular Function: callose binding [ISS]
    polysaccharide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFVLVMIL LAMAGHSSGT WCVCKEGLSE AMLQKTLDYA CGAGADCGPI HQTGPCFNPN  60
   61 TVKSHCSYAV NSFFQKKGQS LGTCDFAGTA TFSASDPSYT TCPFPASASG SGTTTPVTTT 120
  121 PSTRVPTTTN TRPYTITPST GGGLGIPSGI NPDYTDPSFG FKLQSPRFGF IVLFTLFLPF 180
  181 YLFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] Pfam 45.60206 No description for PF07983.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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