YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ARI9_ARATH

General Information:
Name(s) found: ARI9_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana GN=ARI9 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 543 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFSDDDMID NKSGEENYSY GGGNESDDYN DVVDTIIPSE KSYVILKEED ILKLQRDDIE  60
   61 RVSSILSLSQ VEVIVLLLHY NWCVSKVEDE WFTDEERIRK AVGLLKEPVV DFNGGEKDKK 120
  121 CRKVNIQCGI CFESYTREEI ARVSCGHPYC KTCWAGYITT KIEDGPGCLR VKCPEPSCSA 180
  181 AVGKDMIEDV TETKVNEKYS RYILRSYVED GKKIKWCPSP GCGYAVEFGG SESSSYDVSC 240
  241 LCSYRFCWNC SEDAHSPVDC DTVSKWIFKN QDESENKNWM LANSKPCPEC KRPIEKNDGC 300
  301 NHMTCSAPCG HEFCWICLKA YRRHSGACNR FVVEQAESKR ALLQSEIKRY THYYVRWAEN 360
  361 QSSRLKAMRD LEKLQSVQLK ELSDNQCTSE TQLQFTVDAW LQIIECRRVL KWTYAYGYYL 420
  421 QDLPKRKFFE YLQGEAESGL ERLHHCAENE LKQFFIKSED PSDTFNAFRM KLTGLTTVTK 480
  481 TYFENLVKAL ENGLVDVTHN EFPPDNETKS TQEKYEEYQD YEDDFLETQR LYDEALLSGC 540
  541 YYD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] MSA 2.349993 View MSA. No confident structure predictions are available.
    2 View Details [113..212] PSI-BLAST 3.09691 Solution Structure of the RING finger Domain of the human UbcM4-interacting Protein 4
    3 View Details [213..271] FFAS03 2.28 Solution Structure of the IBR domain of the RING finger protein 31 protein
    4 View Details [272..330] PSI-BLAST 5.69897 Solution Structure of the C-terminal RING from a RING-IBR-RING (TRIAD) motif
    5 View Details [331..543] MSA 7.546997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle