YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: RL71_ARATH

General Information:
Name(s) found: RL71_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|75265523|sp|Q9SAI5.1|RL71_ARATH RecName: Full=60S ribosomal protein L7-1 [NCBI NR]
  • gi|6503287|gb|AAF14663.1|AC011713_11 Strong similarity to gi|445613 ribosomal protein L7 from Solanum tuberosum. [Arabidopsis thaliana] [NCBI NR]
  • gi|27765020|gb|AAO23631.1| At1g80750 [Arabidopsis thaliana] [NCBI NR]
  • pir||A96840 hypothetical protein F23A5.10 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15220825|ref|NP_178190.1| 60S ribosomal protein L7 (RPL7A) [Arabidopsis thaliana] [NCBI NR]
  • gi|110742920|dbj|BAE99356.1| putative ribosomal protein L7 [Arabidopsis thaliana] [NCBI NR]
  • 60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1 [Swiss-Prot]
  • (Q9SAI5) F23A5.10 protein (At1g80750) [athaliana3702.FASTAC.txt]
  • At1g80750 [Arabidopsis thaliana]gi|6503287|gb|AAF14663.1| Strong similarity to gi|445613 ribosomal protein L7 from Solanum tuberosum. [Arabidopsis thaliana]gi|15220825|ref|NP_178190.1| 60S ribosomal protein L7 (RPL7A) [Arabidopsis thaliana]gi|25295064| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 60S ribosomal protein L7 (RPL7A) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 60S ribosomal protein L7 (RPL7A) | chr1:30353944-30355326 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g80750 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • structural constituent of ribosome / transcription regulator [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative ribosomal protein L7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L7-1 [nr-271106-contam.fasta]
  • Strong similarity to gi|445613 ribosomal protein L7 from Solanum tuberosum. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L30/L7 family protein | chr1:30349052-30350434 FORWARD LENGTH=247 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 247 amino acids

    Gene Ontology:
    Cellular Component: large ribosomal subunit [ISS]
    cytosolic large ribosomal subunit [IDA]
    nucleolus [IDA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: structural constituent of ribosome [IEA][ISS]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR  60
   61 AKEVDMIRMK QRVKRPKSSP PPVKSDLVFI IRIQGKNDMH PKTKRILNNL QLKSVFTGVF 120
  121 AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH 180
  181 KILGIEDLVN EIARVGDHFR EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN 240
  241 DLISKMN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] Pfam 4.107905 No description for PF08079.3 was found. No confident structure predictions are available.
    2 View Details [82..247] PSI-BLAST 62.30103 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle