YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LEUD2_ARATH

General Information:
Name(s) found: LEUD2_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|7529742|emb|CAB86927.1| 3-isopropylmalate dehydratase-like protein (small subunit) [Arabidopsis thaliana] [NCBI NR]
  • gi|29824169|gb|AAP04045.1| putative 3-isopropylmalate dehydratase small subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|17529162|gb|AAL38807.1| putative 3-isopropylmalate dehydratase protein small subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|15231608|ref|NP_191458.1| aconitase C-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T47781 3-isopropylmalate dehydratase-like protein (small subunit) - Arabidopsis thaliana [NCBI NR]
  • 3-isopropylmalate dehydratase small subunit 2 OS=Arabidopsis thaliana GN=IPMI1 PE=1 SV=1 [Swiss-Prot]
  • (Q9LYT7) 3-isopropylmalate dehydratase-like protein (Small subunit) (Putative 3-isopropylmalate dehydratase small subunit) [athaliana3702.FASTAC.txt]
  • putative 3-isopropylmalate dehydratase small subunit [Arabidopsis thaliana]gi|17529162|gb|AAL38807.1| putative 3-isopropylmalate dehydratase protein small subunit [Arabidopsis thaliana]gi|7529742|emb|CAB86927.1| 3-isopropylmalate dehydratase-like protei [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aconitase C-terminal domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | aconitase C-terminal domain-containing protein | chr3:21808501-21809262 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 3-isopropylmalate dehydratase-like protein (small subunit) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 3-isopropylmalate dehydratase small subunit [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 3-isopropylmalate dehydratase protein small subunit [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hydro-lyase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: IPMI1 | isopropylmalate isomerase 1 | chr3:21797524-21798285 REVERSE LENGTH=253 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 3-isopropylmalate dehydratase-like protein (Small subunit) OS=Arabidopsis thaliana GN=F17J16_40 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: plastid [IDA]
    Biological Process: leucine biosynthetic process [IEA]
    metabolic process [IEA][ISS]
    Molecular Function: hydro-lyase activity [ISS]
    3-isopropylmalate dehydratase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSQQFLNP TLFKSLASSN KNSCTLCPSP FLQLKSASTI FNYKPLTSSS ATIITRVAAS  60
   61 SSDSGESITR ETFHGLCFVL KDNIDTDQII PAEYGTLIPS IPEDREKLGS FALNGLPKFY 120
  121 NERFVVPGEM KSKYSVIIGG DNFGCGSSRE HAPVCLGAAG AKAVVAESYA RIFFRNCVAT 180
  181 GEIFPLESEV RICDECKTGD VVTIEHKEDG SSLLINHTTR KEYKLKPLGD AGPVIDAGGI 240
  241 FAYARKAGMI PSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 57.522879 STERIC AND CONFORMATIONAL FEATURES OF THE ACONITASE MECHANISM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-isopropylmalate dehydratase activity
    		•  12.5837761061391 bayes_pls_golite062009
  • catalytic activity
    		•  0.740488970089403 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle