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Protein Overview: RS202_ARATH

General Information:
Name(s) found: RS202_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79314572|ref|NP_001030826.1| 40S ribosomal protein S20 (RPS20B) [Arabidopsis thaliana] [NCBI NR]
  • gi|75266342|sp|Q9STY6.1|RS202_ARATH RecName: Full=40S ribosomal protein S20-2 [NCBI NR]
  • pir||T12992 ribosomal protein S20, cytosolic - Arabidopsis thaliana [NCBI NR]
  • gi|5541704|emb|CAB51209.1| 40S RIBOSOMAL PROTEIN S20 homolog [Arabidopsis thaliana] [NCBI NR]
  • gi|30692858|ref|NP_850665.1| 40S ribosomal protein S20 (RPS20B) [Arabidopsis thaliana] [NCBI NR]
  • gi|27765022|gb|AAO23632.1| At3g47370 [Arabidopsis thaliana] [NCBI NR]
  • gi|21617905|gb|AAM66955.1| 40S ribosomal protein S20-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232789|ref|NP_190321.1| 40S ribosomal protein S20 (RPS20B) [Arabidopsis thaliana] [NCBI NR]
  • gi|110743828|dbj|BAE99749.1| 40S ribosomal protein S20-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110743118|dbj|BAE99451.1| 40S ribosomal protein S20-like protein [Arabidopsis thaliana] [NCBI NR]
  • 40S ribosomal protein S20-2 OS=Arabidopsis thaliana GN=RPS20B PE=2 SV=1 [Swiss-Prot]
  • (Q9STY6) 40S ribosomal protein S20-like protein (At3g47370) [athaliana3702.FASTAC.txt]
  • 40S ribosomal protein S20-like protein [Arabidopsis thaliana]gi|5541704|emb|CAB51209.1| 40S RIBOSOMAL PROTEIN S20 homolog [Arabidopsis thaliana]gi|27765022|gb|AAO23632.1| At3g47370 [Arabidopsis thaliana]gi|30692858|ref|NP_850665.1| 40S ribosomal protei [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 40S ribosomal protein S20 (RPS20B), 40S RIBOSOMAL PROTEIN S20 - ARABIDOPSIS THALIANA,PID:g1350956 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | 40S ribosomal protein S20 (RPS20B) | chr3:17464656-17465422 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 40S ribosomal protein S20-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 40S RIBOSOMAL PROTEIN S20 homolog [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 40S ribosomal protein S20-2 [nr-271106-contam.fasta]
  • At3g47370 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein S10p/S20e family protein | chr3:17453671-17454437 REVERSE LENGTH=122 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 122 amino acids

    Gene Ontology:
    Cellular Component: cytosolic ribosome [IDA]
    cytosolic small ribosomal subunit [IDA]
    cell wall [IDA]
    membrane [IDA]
    small ribosomal subunit [ISS]
    nucleolus [IDA]
    Biological Process: translation [IEA][ISS]
    Molecular Function: RNA binding [IEA]
    structural constituent of ribosome [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYEPMKPTK AGLEAPLEQI HKIRITLSSK NVKNLEKVCT DLVRGAKDKR LRVKGPVRMP  60
   61 TKVLKITTRK APCGEGTNTW DRFELRVHKR VIDLFSSPDV VKQITSITIE PGVEVEVTIA 120
  121 DS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] PSI-BLAST 24.221849 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle