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Protein Overview: gi|25406184, gi|...

General Information:
Name(s) found: gi|25406184 [NCBI NR]
gi|15218497 [NCBI NR]
gi|12325283 [NCBI NR]
Description(s) found:
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  • pir||A96749 unknown protein T10D10.5 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218497|ref|NP_177392.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12325283|gb|AAG52590.1|AC016529_21 unknown protein; 24890-26925 [Arabidopsis thaliana] [NCBI NR]
  • (Q9C9E6) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein T10D10.5 [imported] - Arabidopsis thalianagi|12325283|gb|AAG52590.1| unknown protein; 24890-26925 [Arabidopsis thaliana]gi|15218497|ref|NP_177392.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45597.1); contains InterPro domain Transmembra [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein; 24890-26925 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G01070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45597.1); contains InterPro domain Transmembrane receptor, eukaryota; (InterPro:IPR009637) | chr1:27289966-27292001 REVERSE [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | Lung seven transmembrane receptor family protein | chr1:27286304-27288339 REVERSE LENGTH=509 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Lung seven transmembrane receptor-like protein OS=Arabidopsis thaliana GN=T10D10.5 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 509 amino acids

    Gene Ontology:
    Cellular Component: Golgi apparatus [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLHLLLLLC LSSSLKVQAS VHEYRSERFV SKGNAFVFHG GSEGIYSSSP SDNFTSDSDS  60
   61 VSFIRFEKIK FQRPEEVSNR SSLSIHAVVF EVEDRENIGG SAYGGQRAVC CTSDLAKLGV 120
  121 CSHGDVIYRP SAKDSGWPQV FGVSLAENEF SVILPTRSIQ VTRTGMYNLY FIHCDSDLKD 180
  181 LVVEGKTIWK NPTGYLPGRM APLMYFYGFM SLAFVLLGIF WFSQCARFWR EVLPLQNCLT 240
  241 LVITLGMCEM ALWYFDYAEF NETGIRPTVI TIWAVTFGSI KRTSARIIIL MVSMGYGVVR 300
  301 PTLGGFTSKV IMLGVTFFIA SEILELMENV GAVSDLSGKA RLFFVLPVAI LDAFFIIWIF 360
  361 KSLSATFKKL QTRRLLVKLD IYRKFTNALA VDILVSLGWI CYELYFKSKD VYNEHWQNAW 420
  421 IIPAFWQLLS FSLLIVICSL WAPSQNSTRY AFSGSSGDTS AEFEKDDYTL TLIKPSPIPS 480
  481 HEVKNLSETR LLPADEGEPE KDLEEDKRE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] deduced N/A No confident structure predictions are available.
    2 View Details [155..509] FFAS03 1.1 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle