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Protein Overview: gi|3033377, gi|7...

General Information:
Name(s) found: gi|7485812 [NCBI NR]
gi|31711960 [NCBI NR]
gi|3033377 [NCBI NR]
gi|20466740 [NCBI NR]
gi|15226834 [NCBI NR]
Description(s) found:
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  • pir||T00463 probable berberine bridge enzyme [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|31711960|gb|AAP68336.1| At2g34810 [Arabidopsis thaliana] [NCBI NR]
  • gi|3033377|gb|AAC12821.1| putative berberine bridge enzyme [Arabidopsis thaliana] [NCBI NR]
  • gi|20466740|gb|AAM20687.1| putative berberine bridge enzyme [Arabidopsis thaliana] [NCBI NR]
  • gi|15226834|ref|NP_181027.1| FAD-binding domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • (O64745) Putative berberine bridge enzyme (At2g34810) [athaliana3702.FASTAC.txt]
  • At2g34810 [Arabidopsis thaliana]gi|20466740|gb|AAM20687.1| putative berberine bridge enzyme [Arabidopsis thaliana]gi|3033377|gb|AAC12821.1| putative berberine bridge enzyme [Arabidopsis thaliana]gi|7485812|pir||T00463 probable berberine bridge enzyme [ [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 FAD-binding domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | FAD-binding domain-containing protein | chr2:14692371-14693993 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g34810 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative berberine bridge enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • electron carrier [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | FAD-binding Berberine family protein | chr2:14685292-14686914 FORWARD LENGTH=540 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g34810 OS=Arabidopsis thaliana GN=At2g34810 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 540 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: response to wounding [IEP]
    response to jasmonic acid stimulus [IEP]
    Molecular Function: oxidoreductase activity [IEA]
    FAD binding [IEA]
    catalytic activity [IEA]
    electron carrier activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFWSRPLTF LIIIIYLIIQ QVNSSPPSLS IPEHFLRCLD TQPSDHGSPN SRTAVIPTNS  60
   61 SFSTNLMNGV RNLRFASVST RKPEVIVAAV TETHIRATIS CCKLLNLELR IRSGGHDYEG 120
  121 FSYTSPVPFV ILDMYNFNKI DINMKDETVW IQSGASLGQL YYNIASKSKV HAFPAGVCPK 180
  181 VGAGGHFSGG GFGNLMRKYG LSIDHIIDAQ IMDANGKVYR NRQAMGEDVF WAIRGGGGGS 240
  241 YGVILAWKIK LVRVPEKVTV FKLERTVREG AVDLVHKWQQ VAPVIDRDLF IRLEIKPINR 300
  301 KISKGKTIKV SFIGMFLGLP ERLLNITKQS FPELHLTKED CMVKKWIESS VFWANYPEKA 360
  361 PIELLLKRVS TNEYYWKRTS DFVQAPISKQ GLAKIFQTMI DHSPLPRRVW MQWNPWGGKM 420
  421 AEIASDATAF VHRGGNVFMI EHFMNWYRPG DELEEKFLAI ARSFKEAMAP FVSKNPREAF 480
  481 FNYRDVDIGI TTPGYNATYE GAKVYGDSYF KGNYLRLVKI KARFDRTNFF RSQQGIPVLA 540
  541

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..540] PSI-BLAST 52.69897 Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P21)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle