General Information: |
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Name(s) found: |
YDR365W-B
[SGD]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Saccharomyces cerevisiae |
Length: | 1755 amino acids |
Gene Ontology: |
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Cellular Component: |
retrotransposon nucleocapsid
[ISS]
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Biological Process: |
transposition, RNA-mediated
[ISS]
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Molecular Function: |
DNA-directed DNA polymerase activity
[ISS]
RNA-directed DNA polymerase activity [ISS] RNA binding [ISS] protein binding [ISS] ribonuclease activity [ISS] peptidase activity [ISS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MESQQLSQHS PISHGSACAS VTSKEVHTNQ DPLDVSASKT EECEKASTKA NSQQTTTPAS 60 61 SAVPENPHHA SPQPASVPPP QNGPYPQQCM MTQNQANPSG WSFYGHPSMI PYTPYQMSPM 120 121 YFPPGPQSQF PQYPSSVGTP LSTPSPESGN TFTDSSSADS DMTSTKKYVR PPPMLTSPND 180 181 FPNWVKTYIK FLQNSNLGGI IPTVNGKPVR QITDDELTFL YNTFQIFAPS QFLPTWVKDI 240 241 LSVDYTDIMK ILSKSIEKMQ SDTQEANDIV TLANLQYNGS TPADAFETKV TNIIDRLNNN 300 301 GIHINNKVAC QLIMRGLSGE YKFLRYTRHR HLNMTVAELF LDIHAIYEEQ QGSRNSKPNY 360 361 RRNLSDEKND SRSYTNTTKP KVIARNPQKT NNSKSKTARA HNVSTSNNSP STDNDSISKS 420 421 TTEPIQLNNK HDLHLRPGTY *IYGKSH*SF ***TPWTPPS RFRSITNPYK ICSSHTLSII 480 481 *S*HKRS*CS KKKYTN*RYW *PTISLPGQH QNINKGIAHS *HSL*LTQFE *IGCSRYHSM 540 541 LYQKRLRTI* RHCTCTYRTI WRLLLGI*KV LASIKYLRTH HQ*CPYK*KY TQISLSFHSS 600 601 NACACQCTDN SILT*K*HHH VF*RIRCRLV *CY*LSMS*L FNRQKHQTQT YQRFTTKIPK 660 661 FIRTLSIPTY *HIWSSSQPT K*CTILFHLI Y**DNKIPLG LSITRPSRGL YPRCFYYDTS 720 721 FY*EPVSGQC LGYTNGPWF* VY*QNSP*IP *KKWYNSMLY NHSGFPSTWS R*TAKPYLIR 780 781 *LPYSTAM*W FTELFMVLCN RIFYYCEKFT SFT*KQKICK TTCWLGRT*Y QYFVTFRSTC 840 841 YRQ*SQP*LQ NTSSWHPRLR STSVSKLLWI YHLSSILKED SRYN*LCYSS GQGIQIRSIQ 900 901 LRRTHFR*RL KPFNCFISFV HCVK*DPRIQ *S*HRI*P*L PIRH*TTS*A TEKCPFKSCE 960 961 SNRFHTSVNS Y*RFETCF*N QYSRTQRS*P QHI*I*YSSI KEEI*HPPNF QYREYRFGWY1020 1021 A*IKCSFTCS HVPI*HT*VV ARQ*I*RFQT LRLVQ*K*D* SYKRTNIQYG WYQQQNCSAD1080 1081 K*PRD*EKDY TPFTFNRCFS TGK*FIAQYC SYQNANYCF* TEYRGIYHR* SPTP*STSRI1140 1141 SYRIP*PI*R TPTDKFSSN* FQFGWYW*L* CLYYYQQ*EK IIRR**N*N* GITRHMEY*E1200 1201 YA*FRTSEIE ETNSPDCSCK SSKINQTNTD NLTIR*GNHL **RY*RKRKI YRGIPQRSQS1260 1261 TVEDENLGH* RIL*QKRNRP *KSNKLNVYL QQET*RYS*S *ICCKR*YSA S*HLRLRHAI1320 1321 QYRTSLCIND IPVTCIRQ*L LYYTIRHIFG IFVCRHQRRI IHKTSTTFRN E**VDTFEEI1380 1381 TLWIETKWSE LVRNYQIIPD TTMWYGRSSW MVMRI*KQSS DNLFIRR*YG IV*QKSKFKQ1440 1441 KNYREA*DAI RHQDYKSRRK **GNSI*HTW LRNQISKR*I HEIRYGKLIN *ENTQIKRTF1500 1501 ESKRKKT*RS RSTRSLYRPG *TRNR*R*IQ REGT*NAKVD WSSFICWI*I *I*LTILHQH1560 1561 TCSTYTIPL* ASFRHDI*VN TIHVGH*R*T INMAQKQTYQ AR**TSRNKR CFIW*PTILQ1620 1621 VTNW*HFPTQ RKSDWRKVDK GFVNMHFNYR SRNTRSQ*SY TAIE*PQSPC ART*QETNYR1680 1681 LTY***INDQ YN*VYK*REI *KQIFWHKGN ET*R*SIR** FIRILHRDQE EHC*CDDKTS1740 1741 SDKNI*TIN* QMDSL |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Hazbun TR, et al. (2003) | |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Reinke A, et al. (2004) | |
View Run | No Comments | Reinke A, et al. (2004) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.93 |
Source: Reynolds et al. (2008)