General Information: |
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Name(s) found: |
YLR410W-B
[SGD]
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Description(s) found:
Found 2 descriptions. SHOW ALL |
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Organism: | Saccharomyces cerevisiae |
Length: | 1768 amino acids |
Gene Ontology: |
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Cellular Component: |
retrotransposon nucleocapsid
[ISS![]() |
Biological Process: |
transposition, RNA-mediated
[ISS![]() |
Molecular Function: |
DNA-directed DNA polymerase activity
[ISS![]() RNA-directed DNA polymerase activity [ISS ![]() RNA binding [ISS ![]() protein binding [ISS ![]() ribonuclease activity [ISS ![]() peptidase activity [ISS ![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MESQQLHQNP HSLHGSAYAS VTSKEVPSNQ DPLAVSASNL PEFDRDSTKV NSQQETTPGT 60 61 SAVPENHHHV SPQPASVPPP QNGQYQQHGM MTPNKAMASN WAHYQQPSMM TCSHYQTSPA 120 121 YYQPDPHYPL PQYIPPLSTS SPDPIDLKNQ HSEIPQAKTK VGNNVLPPHT LTSEENFSTW 180 181 VKFYIRFLKN SNLGDIIPND QGEIKRQMTY EEHAYIYNTF QAFAPFHLLP TWVKQILEIN 240 241 YADILTVLCK SVSKMQTNNQ ELKDWIALAN LEYDGSTSAD TFEITVSTII QRLKENNINV 300 301 SDRLACQLIL KGLSGDFKYL RNQYRTKTNM KLSQLFAEIQ LIYDENKIMN LNKPSQYKQH 360 361 SEYKNVSRTS PNTTNTKVTT RNYHRTNSSK PRAAKAHNIA TSSKFSRVNN DHINESTVSS 420 421 QYLSDDNELS LRPATERI*A NTHNRLE*RT T*SPSY*FRS FANACQISPL FTPCNTQF*N 480 481 KHSRCSKTRH SYKCHW*SSL QLSERHQNIN KSTTHTKHSL *SIKFE*AG* PKYYCLLYQK 540 541 HFRKIGWYST SSHSQTWRLL LVI*KIPNSF AHFKANNKQR QQKQKRK*IS ISVNTSNAWT 600 601 C*LPKYSEVS *EECSYIFEG IGY*MV*R*H ISMS*LSNRQ KHET*TCQRI TTKVPRII*A 660 661 FSVLAYRYIW SCTSLTEKCT FLLYIVYR*E NQIPMGVPIT RPS*RIYPQC FYIDISIY*E 720 721 PIQCSRSSYP DGSWLRVH*Q NSS*VLYEQR YYCMLYNHGR F*STRCR*TI KSYFIKRLSH 780 781 TASLQWSTKS SMVLSSRIFY YNQKFISLTK KR*ICKTTCR FSWTGHYYYT TFRSTGYS*Q 840 841 P*SRLENTSS WHSRLRLTSV TKLLWLYYLS SIIKKDSRYY QLRYITRQPI QIGPIQL*YT 900 901 HL***SQSFN SP*PIFY*TK *NRAVI*SKY RI*S*LSIGD *NKL*SSSER LLVPINEPLT 960 961 IRPRTSPKST CTKRS*CRHI *IQYSSISCT ISYTPYH**R EYRNGWYH*I RYYFT*TLVY1020 1021 LHCTKPKATW *SQ*YD*FDL TG*S*LWT*K HQNYTFGWYG GTIYSTK**Y KYQIQDYK*Y1080 1081 ALNR*PFVQQ *IHYSHHLHR NKGCM**YTL H*YGSARISI F*PCDS*YNA *QILKKCYGF1140 1141 YS*RPPTS*L NP*ISYGHF* CFKRYSTHTL SSD*FQFGWY G*F*CSDYYQ K*EKIIRR*N1200 1201 *N*GIPRHME **EYEKSGTT KIEETHKFNC SNKRSEIDQT SSNDLKI**S NYI**RQQRK1260 1261 RQIC*SLS*R N*PTIENEHL GYKQIL**K* HRS*KSNKLN VYI*QET*WY TQS*ICCKRR1320 1321 HSTPRYI*F* YAIQYRTSLC TDDVTVNRIR QRLLYHTAGH ILCLLIC*YQ RRIIHKTSTT1380 1381 FRFE**ITTF EKITLWFETK WCKLV*NH*I IFNKLLRHAR SSRMVMRI*E *SSNNLLIR*1440 1441 *YDIIQQRLK CK*ENHNNTQ ETIRYKDNKS G*KR*RNSVR HTWIRDQISK KQVHEIRYGK1500 1501 ILDRKITQTK RTFEPKRKET *SSRSTRSLY RPG*TRNR*R *IQREGT*NA KVDWSSFICW1560 1561 I*I*I*LTIL HQHTCSTYTI PL*TSFRHDI *VNTIHVGH* R*TINMAQKQ TYQAR**TSR1620 1621 NKRCFIW*PT ILQVTNW*HF PTQRKSDWRK VDKGFVNMHF NYRSRNTRSQ *SYTAIEPQS1680 1681 PCART*QETN Y*RLTY***I NDQYN*VYK* REI*KQIFWH KGNET*R*SI R**FIRILHR1740 1741 DQEEHC*CDD KTSSDKNI*T INKQMDSL |
The following runs contain data for this protein:
  | BAIT | COMMENTS | PUBLICATION |
View Run | No Comments | Reinke A, et al. (2004) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.84 |
Source: Reynolds et al. (2008)