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Protein Overview: ARFN_ARATH

General Information:
Name(s) found: ARFN_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESGNVVNTQ PELSGIIDGS KSYMYEQLWK LCAGPLCDIP KLGEKVYYFP QGHIELVEAS  60
   61 TREELNELQP ICDFPSKLQC RVIAIQLKVE NNSDETYAEI TLMPDTTQVV IPTQNQNQFR 120
  121 PLVNSFTKVL TASDTSVHGG FSVPKKHAIE CLPPLDMSQP LPTQEILAID LHGNQWRFRH 180
  181 IYRGTAQRHL LTIGWNAFTT SKKLVEGDVI VFVRGETGEL RVGIRRAGHQ QGNIPSSIVS 240
  241 IESMRHGIIA SAKHAFDNQC MFIVVYKPRS SQFIVSYDKF LDVVNNKFNV GSRFTMRFEG 300
  301 DDFSERRSFG TIIGVSDFSP HWKCSEWRSL EVQWDEFASF PRPNQVSPWD IEHLTPWSNV 360
  361 SRSSFLKNKR SREVNEIGSS SSHLLPPTLT QGQEIGQQSM ATPMNISLRY RDITEDAMTP 420
  421 SRLLMSYPVQ PMAKLNYNNV VTPIEENITT NAVASFRLFG VSLATPSVIK DPVEQIGLEI 480
  481 SRLTQEKKFG QSQILRSPTE IQSKQFSSTR TCTKVQMQGV TIGRAVDLSV LNGYDQLILE 540
  541 LEKLFDLKGQ LQARNQWEIA FTNNEEDKML VGEDPWPEFC NMVKKIFIYS KEEVKNLKSR 600
  601 KSLSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] MSA 1.077982 View MSA. No confident structure predictions are available.
    2 View Details [104..237] PSI-BLAST 35.154902 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [238..339] MSA 4.10999 View MSA. No confident structure predictions are available.
    4 View Details [340..470] MSA 1.113984 View MSA. No confident structure predictions are available.
    5 View Details [471..605] FFAS03 1.21 Solution structure of RSGI RUH-024, a PB1 domain in human cDNA, KIAA0049


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle