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Protein Overview: orf19.9660, orf1...

General Information:
Name(s) found: orf19.2112 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.9660 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • orf19.2112 CGDID:CAL0005277 Assembly 19, Contig19-10139 (209044, 208232) CDS, reverse complemented, translated using codon table 12 (270 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.2112 CGDID:CAL0005277 Assembly 19, Contig19-20139 (211065, 210253) CDS, reverse complemented, translated using codon table 12 (270 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 270 amino acids

    Gene Ontology:
    Cellular Component: U4/U6 x U5 tri-snRNP complex [IEA]
    U5 snRNP [IEA]
    Biological Process: generation of catalytic spliceosome for second transesterification step [IEA]
    nuclear retention of unspliced pre-mRNA at the site of transcription [IEA]
    Molecular Function: second spliceosomal transesterification activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFSNLLSNE INKKRKKVAA NGRKRSKVST TAKEPAVVVE HASETINPQP TTTNDEPSEE  60
   61 QLDTKLSQFG ELDTSLSKSE KARKLQLLLQ QQIKNTKYKA WLDQEAPLYQ DPEKQLITLD 120
  121 LITDITNKQD EVYLKLRVYI KQLIKQWQEC DNDDQELLME TKKSIVKLLY KLRSHKLSLD 180
  181 MLISLSTIVY YIQQNEFNKA NESYMKLSIG NVCWPIGVVN VGIHARSAAS KITGASNVSN 240
  241 IMLSESTRRW IISIKRLISF KERVYNNARD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle