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Protein Overview: orf19.11559, orf...

General Information:
Name(s) found: orf19.4078 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.11559 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
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  • orf19.4078 CGDID:CAL0004911 Assembly 19, Contig19-10196 (29316, 30329) CDS, translated using codon table 12 (337 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.4078 CGDID:CAL0004911 Assembly 19, Contig19-20196 (27969, 28982) CDS, translated using codon table 12 (337 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: cytoplasmic exosome (RNase complex) [IEA]
    nuclear exosome (RNase complex) [IEA]
    nucleolus [IEA]
    Biological Process: U4 snRNA 3'-end processing [IEA]
    nuclear polyadenylation-dependent rRNA catabolic process [IEA]
    U1 snRNA 3'-end processing [IEA]
    U5 snRNA 3'-end processing [IEA]
    nuclear polyadenylation-dependent tRNA catabolic process [IEA]
    exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKELSLNQK NYLIQALKSN IRLSTSTNTG GSRKFNQFRP IDIKLSNTRY GSVELSLGKT  60
   61 KVMVNITSRI TEPYQDRPFE GIMTINCEIP NHIKLQSNDT TNNNNDNEDE FINLINRALD 120
  121 RAIRRSNAVD LENLCIIAGE KVWELIIDLQ VLNYDGNLID SGCLAIITAL LDFKKPDVTI 180
  181 NNNNTSNSSS TSGGGGNIIV HDDEMKRPFI ELSILHIPIC LTFSLFNLGS KETNLKTNDI 240
  241 DQEIWLLDGD AMEESCRDGY LIMTMNQNHE LIQLSKIGGG GNNGGVSIDG QQLINLCHES 300
  301 IDEINRLTNL VKSTVKNHQL NRYNNENYKL LESSADR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle