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Protein Overview: orf19.5465, orf1...

General Information:
Name(s) found: orf19.5465 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.12920 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • orf19.5465 CGDID:CAL0005297 Assembly 19, Contig19-10227 (137132, 136434) CDS, reverse complemented, translated using codon table 12 (232 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.5465 CGDID:CAL0005297 Assembly 19, Contig19-20227 (137120, 136422) CDS, reverse complemented, translated using codon table 12 (232 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 232 amino acids

    Gene Ontology:
    Cellular Component: U2-type catalytic step 1 spliceosome [IEA]
    Biological Process: generation of catalytic spliceosome for first transesterification step [IEA]
    Molecular Function: first spliceosomal transesterification activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERKAINKW YPPDYDPSKI PRPKKNANQP IKIRMMAPYS MRCLKCDEYI GARRSFNARK  60
   61 EITNEKYLNI KIIRFYITCP GCNNTITFKT DPKNAGYTPE EGAVRNYEKA KPTETEDDIL 120
  121 ARLQKEEEED QKYHLLQAKR KKNPFWNEQT SGMENLEQRL KEQHHHQKLD QQLEAIQARA 180
  181 VNKDLLESKA RENLQQSTKP VAKRKLVIPT TIKLPKKPRL ARPNPETQNR ST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle