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Protein Overview: CX6A1_RABIT

General Information:
Name(s) found: CX6A1_RABIT [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Cytochrome c oxidase subunit 6A1, mitochondrial OS=Oryctolagus cuniculus GN=COX6A1 PE=3 SV=1 [Swiss-Prot]
    • Organism: Oryctolagus cuniculus
    Length: 109 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAWSRVS QLLGRSRLQV GRPMSSGAHG EEGSARMWKA LTYFVALPGV GVSMLNVYLK  60
   61 SHHEEHERPE FIAYPHLRIR SKPFPWGDGN HTLFHNPHVN PLPTGYEDV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 29.30103 Mitochondrial cytochrome c oxidase subunit VIa

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  12.2317532545955 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  12.2317532545955 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  12.2317532545955 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  11.9189904362651 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  5.77104248101315 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  5.61858135414369 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  5.0189825255034 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.93709142475202 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.77145907631723 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.57436007698077 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.16699951799043 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.97113110639524 bayes_pls_golite062009
  • catalytic activity
    		•  0.448769452796145 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.32

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle