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Protein Overview: CYTC_RAT

General Information:
Name(s) found: CYTC_RAT [Swiss-Prot]
Description(s) found:
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  • gi|736290|emb|CAA34831.1| unnamed protein product [Rattus norvegicus] [NCBI NR]
  • sp|P14841|CYTC_RAT Cystatin C precursor [NCBI NR]
  • pir||S07085 cystatin C precursor - rat (fragment) [NCBI NR]
  • (P14841) Cystatin C precursor (Fragment) [Swiss-Prot]
  • unnamed protein product [Rattus norvegicus]gi|118185|sp|P14841|CYTC_RAT Cystatin C precursorgi|111544|pir||S07085 cystatin C precursor - rat (fragment) [nrdb_11152004_Chlamydomonas]
  • unnamed protein product [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 127 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLAVAWAGTS RPPPRLLGAP QEADASEEGV QRALDFAVSE YNKGSNDAYH SRAIQVVRAR  60
   61 KQLVAGINYY LDVEMGRTTC TKSQTNLTNC PFHDQPHLMR KALCSFQIYS VPWKGTHTLT 120
  121 KSSCKNA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] PSI-BLAST 36.154902 Cystatin C

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase inhibitor activity
    		•  4.09256652564756 bayes_pls_golite062009
  • endopeptidase inhibitor activity
    		•  4.06934751275178 bayes_pls_golite062009
  • metalloendopeptidase inhibitor activity
    		•  3.91155159929014 bayes_pls_golite062009
  • metalloenzyme regulator activity
    		•  3.91155159929014 bayes_pls_golite062009
  • metalloenzyme inhibitor activity
    		•  3.91155159929014 bayes_pls_golite062009
  • protease binding
    		•  3.73826839062329 bayes_pls_golite062009
  • enzyme inhibitor activity
    		•  3.46240889348325 bayes_pls_golite062009
  • cysteine-type endopeptidase inhibitor activity
    		•  2.23436900482885 bayes_pls_golite062009
  • binding
    		•  1.98021211698364 bayes_pls_golite062009
  • protein binding
    		•  1.87374230443113 bayes_pls_golite062009
  • enzyme binding
    		•  1.6342022584305 bayes_pls_golite062009
  • beta-amyloid binding
    		•  0.57867775643241 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.479748849334581 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle