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Protein Overview: SO1969

General Information:
Name(s) found: SO1969 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
  • conserved hypothetical protein [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 153 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYWLMKSEP DEFSIEDLKA RPNQTEPWFG IRNYQARNYM RDAMQIGDKV FFYHSSCKVP  60
   61 GIVGIAEVVT NAYPDSTAFD PESTYFDPKS DPSNPRWLRV DIRFVEQFKE IIPLSLIKSL 120
  121 PQLADMYLVS KGSRLSIQPV TAEQWQAVLM LSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] PSI-BLAST 59.69897 Crystal Structure of the Conserved Hypothetical Protein from Pseudomonas syringae, Northeast Structural Genomics Target PsR62


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle