General Information: |
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Name(s) found: |
SO3462
[shew_pnnl_plus_contams_psm.fasta]
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Description(s) found: |
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Organism: | Shewanella oneidensis |
Length: | 552 amino acids |
Gene Ontology: |
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Cellular Component: | NONE FOUND |
Biological Process: | NONE FOUND |
Molecular Function: | NONE FOUND |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MLCQLSINNF AIVRFLELDF SPGMTSITGE TGAGKSIAID ALGLCLGNRA DASSVRPGAS 60 61 KTEVSARFSL HDVPLAKRWL EDNDLELDDE CILRRTIGSD GRSRAYINGN PVPLTQLKLL 120 121 GQLLVGIHGQ HAHHAMLKSE HQLTLLDSYA NHRLLIDTVT ASYQRCKQIE AELKQLEASQ 180 181 HERIARKQLV QYQVEELDEF DLKVGEFEEI EQEHKRLANG TELVDSCQAS LYLLTDGEES 240 241 NIESLLNKVV SLAENLQSYD PALTNVSTML NEALIQVQES AGELQHYLSK LELDPAYFAY 300 301 LEERLSKAMQ LARKHHVSPD KLAEHHLALK AELTTLDDDE TKLEEIQLQV EASKSAYLAN 360 361 AQKLSQSRAR YAKELDKLVT QSIHELNMPK GKFTIEVNFN PEIMSVNGSD NIEFMVTTNP 420 421 GQPLQPISRV ASGGELSRIG LGIQVITAKK VATPTLIFDE VDVGISGPTA AVVGRMLRSL 480 481 GESTQVLCVT HLPQVAGNGH QHMFVNKFNK AGSTETTMTP LDKEQRIQEL ARLLGGDTIT 540 541 SNTLANAREL LQ |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..171] | 27.0 | Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases. | |
2 | View Details | [172..337] | 1.45 | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain | |
3 | View Details | [338..552] | 15.69897 | Peptide transporter Tap1, C-terminal ABC domain |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||
3 |
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)