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Protein Overview: SO4751

General Information:
Name(s) found: SO4751 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
Found 4 descriptions.
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  • ATP synthase F0 B subunit [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 156 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFNATLIGQ TVAFIIFVWF CMKFVWPPLM NAIEARQKRI ADGLADADRA VKDLELAQAK  60
   61 ATDQLKEAKV TANEIIEQAN KRKAQIVEEA KTEADAERAK IIAQGKAEIE AERNRVKEDL 120
  121 RKQVATLAIM GAEKILERSI DPAAHSDIVN KLVAEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] MSA 3.386996 View MSA. No confident structure predictions are available.
    2 View Details [67..156] PSI-BLAST 4.0 F1F0 ATP synthase subunit B, membrane domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  13.4958765229456 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  11.6977167590263 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  9.95066935525283 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  8.85439283401521 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  5.13805155650973 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.04374327766634 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.64120459994573 bayes_pls_golite062009
  • transporter activity
    		•  2.93091397928047 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.82224868778929 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.79688978937497 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle