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Protein Overview: PTH_SHIFL

General Information:
Name(s) found: PTH_SHIFL [Swiss-Prot]
Description(s) found:
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  • gi|46576792|sp|Q83LE1.1|PTH_SHIFL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH [NCBI NR]
  • Peptidyl-tRNA hydrolase OS=Shigella flexneri GN=pth PE=3 SV=1 [Swiss-Prot]
  • peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 2457T]gi|24112603|ref|NP_707113.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 301]gi|24051507|gb|AAN42820.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 301]gi|30040976|gb|AAP16706.1| pe [nrdb_11152004_Chlamydomonas]
  • Peptidyl-tRNA hydrolase (PTH) [nr-271106-contam.fasta]
    • Organism: Shigella flexneri
    Length: 194 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIKLIVGLA NPGAEYAATR HNAGAWFVDL LAERLRAPLR EEAKFFGYTS RVTLGSEDVR  60
   61 LLVPTTFMNL SGKAVAAMAS FFRINPDEIL VAHDELDLPP GVAKFKLGGG HGGHNGLKDI 120
  121 ISKLGNNPNF HRLRIGIGHP GDKNKVVGFV LGKPPVSEQK LIDEAIDEAA RCTEMWFTDG 180
  181 LTKATNRLHA FKAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] PSI-BLAST 74.154902 PEPTIDYL-TRNA HYDROLASE FROM ESCHERICHIA COLI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aminoacyl-tRNA hydrolase activity
    		•  2.52131013443946 bayes_pls_golite062009
  • catalytic activity
    		•  1.78077210975677 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.734671141446533 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle