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Protein Overview: RL35A_MOUSE

General Information:
Name(s) found: RL35A_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|82885368|ref|XP_930829.1| PREDICTED: similar to ribosomal protein L35a [Mus musculus] [NCBI NR]
  • gi|72679963|gb|AAI00333.1| Ribosomal protein L35A [Mus musculus] [NCBI NR]
  • gi|71681029|gb|AAI00600.1| Ribosomal protein L35A [Mus musculus] [NCBI NR]
  • gi|60422802|gb|AAH90255.1| Ribosomal protein L35A [Mus musculus] [NCBI NR]
  • gi|51338600|sp|O55142.2|RL35A_MOUSE RecName: Full=60S ribosomal protein L35a [NCBI NR]
  • gi|26389955|dbj|BAC25818.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|20073085|gb|AAH27223.1| Rpl35a protein [Mus musculus] [NCBI NR]
  • gi|194473613|ref|NP_001123957.1| ribosomal protein L35a [Mus musculus] [NCBI NR]
  • gi|194440715|ref|NP_001123956.1| ribosomal protein L35a [Mus musculus] [NCBI NR]
  • gi|15042947|ref|NP_067313.2| ribosomal protein L35a [Mus musculus] [NCBI NR]
  • gi|15024264|emb|CAA76215.2| ribosomal protein L35a [Mus musculus] [NCBI NR]
  • gi|149268718|ref|XP_001480314.1| PREDICTED: hypothetical protein [Mus musculus] [NCBI NR]
  • gi|149255478|ref|XP_001472582.1| PREDICTED: hypothetical protein [Mus musculus] [NCBI NR]
  • gi|149254579|ref|XP_001479869.1| PREDICTED: hypothetical protein [Mus musculus] [NCBI NR]
  • gi|149253849|ref|XP_001474709.1| PREDICTED: hypothetical protein isoform 2 [Mus musculus] [NCBI NR]
  • gi|149253847|ref|XP_001474693.1| PREDICTED: hypothetical protein isoform 1 [Mus musculus] [NCBI NR]
  • gi|149253670|ref|XP_001474486.1| PREDICTED: hypothetical protein isoform 2 [Mus musculus] [NCBI NR]
  • gi|149253668|ref|XP_001474472.1| PREDICTED: hypothetical protein isoform 1 [Mus musculus] [NCBI NR]
  • gi|149250385|ref|XP_001475682.1| PREDICTED: hypothetical protein [Mus musculus] [NCBI NR]
  • gi|149250002|ref|XP_001479993.1| PREDICTED: hypothetical protein [Mus musculus] [NCBI NR]
  • gi|149249665|ref|XP_001480480.1| PREDICTED: hypothetical protein [Mus musculus] [NCBI NR]
  • gi|149249596|ref|XP_001480091.1| PREDICTED: hypothetical protein [Mus musculus] [NCBI NR]
  • gi|149246543|ref|XP_001474737.1| PREDICTED: hypothetical protein [Mus musculus] [NCBI NR]
  • gi|149245460|ref|XP_001478748.1| PREDICTED: hypothetical protein [Mus musculus] [NCBI NR]
  • gi|148705462|gb|EDL37409.1| mCG121795 [Mus musculus] [NCBI NR]
  • gi|148696005|gb|EDL27952.1| mCG133520 [Mus musculus] [NCBI NR]
  • gi|148695828|gb|EDL27775.1| mCG128444 [Mus musculus] [NCBI NR]
  • gi|148681179|gb|EDL13126.1| mCG115732 [Mus musculus] [NCBI NR]
  • gi|148666117|gb|EDK98533.1| mCG1036414 [Mus musculus] [NCBI NR]
  • gi|148665415|gb|EDK97831.1| mCG130125, isoform CRA_a [Mus musculus] [NCBI NR]
  • gi|148665413|gb|EDK97829.1| mCG130125, isoform CRA_a [Mus musculus] [NCBI NR]
  • gi|148665411|gb|EDK97827.1| mCG130125, isoform CRA_a [Mus musculus] [NCBI NR]
  • gi|148665410|gb|EDK97826.1| mCG130125, isoform CRA_a [Mus musculus] [NCBI NR]
  • gi|12846322|dbj|BAB27124.1| unnamed protein product [Mus musculus] [NCBI NR]
  • 60S ribosomal protein L35a OS=Mus musculus GN=Rpl35a PE=1 SV=2 [Swiss-Prot]
  • (O55142) 60S ribosomal protein L35a [Swiss-Prot]
  • ribosomal protein L35a [HMR_022704-rand.fasta]
  • 60S ribosomal protein L35a [ipi.MOUSE.v3.06.fasta]
  • ribosomal protein L35a [Rattus norvegicus]gi|38181576|gb|AAH61557.1| Ribosomal protein L35a [Rattus norvegicus]gi|15042947|ref|NP_067313.2| ribosomal protein L35a [Mus musculus]gi|57119|emb|CAA27193.1| unnamed protein product [Rattus norvegicus]gi|713 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 60S ribosomal protein L35a [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_021338) ribosomal protein L35a; RIKEN cDNA 2810431L15 gene [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • ribosomal protein L35a [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • PREDICTED: similar to ribosomal protein L35a [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • PREDICTED: hypothetical protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • PREDICTED: hypothetical protein isoform 2 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • PREDICTED: hypothetical protein isoform 1 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG121795 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG133520 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG128444 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG115732 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG1036414 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG130125, isoform CRA_a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Ribosomal protein L35a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Rpl35a protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 60S RIBOSOMAL PROTEIN L35A [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a;ENSMUSG00000067558;OTTMUSG00000021804;ENSMUSG00000067575;LOC100044516;ENSMUSG00000070519;LOC100048620;LOC100046034;OTTMUSG00000015055 60S ribosomal protein L35a [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a;LOC100046034;LOC100045334;LOC100040169;LOC100048491;LOC100042824;LOC100048620;LOC100045640;LOC100044516;LOC100043423;LOC100043341;LOC100042363 60S ribosomal protein L35a [ipi.MOUSE_jw_12may08.contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a 60S ribosomal protein L35a [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a;LOC100045334;LOC100046034;LOC100043423;LOC100040169;LOC100043341;LOC100042824;LOC100042363;LOC100048491;LOC100048620;LOC100045640;LOC100044516 60S ribosomal protein L35a ENSMUSG00000067558 IPI00115902 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • 60S ribosomal protein L35a [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00115902.2|SWISS-PROT:O55142|TREMBL:Q6ZWX1;Q8BQV7;Q9DC85|ENSEMBL:ENSMUSP00000077857;ENSMUSP00000083355;ENSMUSP00000085198;ENSMUSP00000085251;ENSMUSP00000110727;ENSMUSP00000110728;ENSMUSP00000110730;ENSMUSP00000110731|REFSEQ:NP_001123956;NP_001123957;NP_067313;XP_001472582;XP_001474472;XP_001474486;XP_001474693;XP_001474709;XP_001474737;XP_001475682;XP_001478748;XP_001479869;XP_001479993;XP_001480091;XP_001480314;XP_001480480|VEGA:OTTMUSP00000029872;OTTMUSP00000029873;OTTMUSP00000029874;OTTMUSP00000029875;OTTMUSP00000029876 Tax_Id=10090 Gene_Symbol=Rpl35a;OTTMUSG00000015055;ENSMUSG00000070519;LOC100048620;ENSMUSG00000067575;ENSMUSG00000067558;LOC100046034;LOC100044516;OTTMUSG00000021804 60S ribosomal protein L35a [ipi.MOUSE.fasta.20090209]
  • Tax_Id=10090 Gene_Symbol=LOC100048620;Rpl35a;ENSMUSG00000067558;OTTMUSG00000015055;ENSMUSG00000067575;LOC100044516;LOC100046034;OTTMUSG00000021804;ENSMUSG00000070519 60S ribosomal protein L35a [EBI-IPI_mouse_01-01-2009_reversed.fasta]
  • 60S ribosomal protein L35a OS=Mus musculus GN=Rpl35a [011711_HMR.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a;ENSMUSG00000067558;ENSMUSG00000070519;ENSMUSG00000067575;LOC100046034;LOC100044516;LOC100048620;OTTMUSG00000021804;OTTMUSG00000015055 60S ribosomal protein L35a [ipi.MOUSE.v3.53-HA-DAT.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a;LOC100045334;LOC100046034;LOC100043423;LOC100040169;LOC100043341;LOC100042824;LOC100042363;LOC100048491;LOC100048620;LOC100045640;LOC100044516 60S ribosomal protein L35a ENSMUSG00000067575 IPI00115902 [CPP_MOUSE_1_03-15-2011_reversed.fasta]
  • 60S ribosomal protein L35a OS=Mus musculus GN=Rpl35a PE=2 SV=2 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a;LOC100046034;LOC100505110;LOC100505045 60S ribosomal protein L35a [EBI-IPI_mouse_2_08-18-2011_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a;LOC100046034;LOC100044516;Gm10214;Gm10296;Gm13911;Gm10213;Gm15434;mCG_133520 60S ribosomal protein L35a [EBI-IPI_mouse_3.71_03-24-2010_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a;Gm14279;LOC100505045;LOC100505110 60S ribosomal protein L35a [EBI_IPI_mouse_V3_87_09-27-2011_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Rpl35a;LOC100046034;OTTMUSG00000015055;LOC100044516;OTTMUSG00000021804;ENSMUSG00000067558;LOC100048620;ENSMUSG00000067575;ENSMUSG00000070519 60S ribosomal protein L35a [EBI-IPI_mouse_3.52_11-21-2008_con_reversed.fasta]
  • sp|O55142|RL35A_MOUSE 60S ribosomal protein L35a OS=Mus musculus GN=Rpl35a PE=2 SV=2 [uniprot.sptr.mouse.20130102]
  • tr|Q6ZWX1|Q6ZWX1_MOUSE MCG1036414 OS=Mus musculus GN=Rpl35a PE=4 SV=1 [uniprot.sptr.mouse.20130102]
  • MCG1036414 OS=Mus musculus GN=Rpl35a PE=4 SV=1 [mouse-uniprot-290313-contam.fasta]
  • MCG1036414 OS=Mus musculus GN=Rpl35a PE=2 SV=1 [mouse-uniprot-oct2014-contam.fasta]
  • Isoform of O55142, 60S ribosomal protein L35a OS=Mus musculus GN=Rpl35a PE=1 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 110 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRLWCKAI FAGYKRGLRN QREHTALLKI EGVYARDETE FYLGKRCAYV YKAKNNTVTP  60
   61 GGKPNKTRVI WGKVTRAHGN SGMVRAKFRS NLPAKAIGHR IRVMLYPSRI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] PSI-BLAST 23.09691 Solution Structure of the 50S Ribosomal Protein L35AE from Pyrococcus furiosus. Northeast Structural Genomics Consortium Target PfR48.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  8.74976995123472 bayes_pls_golite062009
  • structural molecule activity
    		•  8.17182185344538 bayes_pls_golite062009
  • translation initiation factor activity
    		•  2.68619850021832 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.39500449599674 bayes_pls_golite062009
  • RNA binding
    		•  2.33551163092904 bayes_pls_golite062009
  • translation regulator activity
    		•  2.20347076721097 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  2.18748808024313 bayes_pls_golite062009
  • binding
    		•  1.82018436093208 bayes_pls_golite062009
  • peptidyltransferase activity
    		•  1.25473146071242 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  0.588710983191844 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  0.588710983191844 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  0.587833689405549 bayes_pls_golite062009
  • ligase activity
    		•  0.179232439709325 bayes_pls_golite062009
  • protein binding
    		•  0.142220848362339 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle