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Protein Overview: gi|27262645

General Information:
Name(s) found: gi|27262645 [NCBI NR]
Description(s) found:
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  • gi|27262645|ref|NP_663760.1| ataxin 2 related protein isoform B [Homo sapiens] [NCBI NR]
  • ataxin 2 related protein isoform B; ataxin-2 domain protein [HMR_022704.fasta]
  • ataxin 2 related protein isoform B [Homo sapiens] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=9606 Splice Isoform 2 of Ataxin-2-like protein [EBI-IPI_human_3.12_11-03-2005_con_reversed.fasta]
  • ataxin 2 related protein isoform B; ataxin-2 domain protein [Homo sapiens] [HumanGallus06162005.fasta]
  • [human_BMb_040710_contam.fasta]
  • ataxin-2-like protein isoform B [Homo sapiens] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • Uncharacterized protein OS=Homo sapiens GN=ATXN2L PE=4 SV=1 [UniProt_Human_05-17-2011_reversed.fasta]
  • GeneSymbol=ATXN2L Synonyms=A2D|A2LG|A2LP|A2RP ataxin-2-like protein isoform B [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • Uncharacterized protein OS=Homo sapiens GN=ATXN2L [122011_hum.fasta]
  • Isoform 2 of Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L [uniprot-human-120502.fasta]
  • IPI:IPI00456367.4|SWISS-PROT:Q8WWM7-5|TREMBL:E9PAR9|ENSEMBL:ENSP00000315650|REFSEQ:NP_663760 Tax_Id=9606 Gene_Symbol=ATXN2L ataxin-2-like protein isoform B [ipi.HUMAN.20110912.fasta]
  • Isoform 2 of Ataxin-2-like protein GN=ATXN2L [Doctor+uniprot-HUMAN-120911.fasta]
  • Tax_Id=9606 Gene_Symbol=ATXN2L ataxin-2-like protein isoform B [human-ipi-270911-contam-BSA.fasta]
  • Isoform of Q8WWM7, Isoform 2 of Ataxin-2-like protein OS=Homo sapiens GN=ATXN2L [2016-04-human-contam-aPKC-His-Par6.fasta]
    • Organism: Homo sapiens
    Length: 1062 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKPQPLQQP SQPQQPPPTQ QAVARRPPGG TSPPNGGLPG PLATSAAPPG PPAAASPCLG  60
   61 PVAAAGSGLR RGAEGILAPQ PPPPQQHQER PGAAAIGSAR GQSTGKGPPQ SPVFEGVYNN 120
  121 SRMLHFLTAV VGSTCDVKVK NGTTYEGIFK TLSSKFELAV DAVHRKASEP AGGPRREDIV 180
  181 DTMVFKPSDV MLVHFRNVDF NYATKDKFTD SAIAMNSKVN GEHKEKVLQR WEGGDSNSDD 240
  241 YDLESDMSNG WDPNEMFKFN EENYGVKTTY DSSLSSYTVP LEKDNSEEFR QRELRAAQLA 300
  301 REIESSPQYR LRIAMENDDG RTEEEKHSAV QRQGSGRESP SLASREGKYI PLPQRVREGP 360
  361 RGGVRCSSSR GGRPGLSSLP PRGPHHLDNS SPGPGSEARG INGGPSRMSP KAQRPLRGAK 420
  421 TLSSPSNRPS GETSVPPPPA VGRMYPPRSP KSAAPAPISA SCPEPPIGSA VPTSSASIPV 480
  481 TSSVSDPGVG SISPASPKIS LAPTDVKELS TKEPGRTLEP QELARIAGKV PGLQNEQKRF 540
  541 QLEELRKFGA QFKLQPSSSP ENSLDPFPPR ILKEEPKGKE KEVDGLLTSE PMGSPVSSKT 600
  601 ESVSDKEDKP PLAPSGGTEG PEQPPPPCPS QTGSPPVGLI KGEDKDEGPV AEQVKKSTLN 660
  661 PNAKEFNPTK PLLSVNKSTS TPTSPGPRTH STPSIPVLTA GQSGLYSPQY ISYIPQIHMG 720
  721 PAVQAPQMYP YPVSNSVPGQ QGKYRGAKGS LPPQRSDQHQ PASAPPMMQA AAAAGPPLVA 780
  781 ATPYSSYIPY NPQQFPGQPA MMQPMAHYPS QPVFAPMLQS NPRMLTSGSH PQAIVSSSTP 840
  841 QYPSAEQPTP QALYATVHQS YPHHATQLHA HQPQPATTPT GSQPQSQHAA PSPVQHQAGQ 900
  901 APHLGSGQPQ QNLYHPGALT GTPPSLPPGP SAQSPQSSFP QPAAVYAIHH QQLPHGFTNM 960
  961 AHVTQAHVQT GITAAPPPHP GAPHPPQVML LHPPQSHGGP PQGAVPQSGV PALSASTPSP1020
 1021 YPYIGHPQGE QPGQAPGFPG GADDRIPPLP PPGELKIVLA AT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] deduced N/A No confident structure predictions are available.
    2 View Details [239..382] Pfam 29.327902 No description for PF06741.4 was found. No confident structure predictions are available.
    3 View Details [383..572] deduced N/A No confident structure predictions are available.
    4 View Details [573..636] deduced N/A No confident structure predictions are available.
    5 View Details [637..897] MSA 1.294997 View MSA. No confident structure predictions are available.
    6 View Details [898..1062] MSA 2.285991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle