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Protein Overview: gi|31880783

General Information:
Name(s) found: gi|31880783 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|31880783|ref|NP_057030.3| pelota homolog [Homo sapiens] [NCBI NR]
    • Organism: Homo sapiens
    Length: 385 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVRKNIEK DNAGQVTLVP EEPEDMWHTY NLVQVGDSLR ASTIRKVQTE SSTGSVGSNR  60
   61 VRTTLTLCVE AIDFDSQACQ LRVKGTNIQE NEYVKMGAYH TIELEPNRQF TLAKKQWDSV 120
  121 VLERIEQACD PAWSADVAAV VMQEGLAHIC LVTPSMTLTR AKVEVNIPRK RKGNCSQHDR 180
  181 ALERFYEQVV QAIQRHIHFD VVKCILVASP GFVREQFCDY LFQQAVKTDN KLLLENRSKF 240
  241 LQVHASSGHK YSLKEALCDP TVASRLSDTK AAGEVKALDD FYKMLQHEPD RAFYGLKQVE 300
  301 KANEAMAIDT LLISDELFRH QDVATRSRYV RLVDSVKENA GTVRIFSSLH VSGEQLSQLT 360
  361 GVAAILRFPV PELSDQEGDS SSEED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] FFAS03 3.82 No description for 2qi2A was found.
    2 View Details [118..275] PSI-BLAST 31.39794 No description for 2hstA was found.
    3 View Details [276..385] PSI-BLAST 32.522879 Solution structures of the C-terminal domain of the human Pelota homolog (CGI-17)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • RNA binding
    		•  3.8176240743328 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  2.50763528378297 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.47457449347285 bayes_pls_golite062009
  • binding
    		•  2.34187530323842 bayes_pls_golite062009
  • structural molecule activity
    		•  2.17996532926344 bayes_pls_golite062009
  • mRNA binding
    		•  1.38466459724533 bayes_pls_golite062009
    		• 1.36644447800624 bayes_pls_golite062009
  • translation release factor activity
    		•  0.481117366173015 bayes_pls_golite062009
  • translation termination factor activity
    		•  0.454816016731369 bayes_pls_golite062009
  • protein binding
    		•  0.381324299701367 bayes_pls_golite062009
  • catalytic activity
    		•  0.264002643439785 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle