element filterable_psm_annotation
diagram proxl-xml-v1.4_diagrams/proxl-xml-v1.4_p21.png
properties
content complex
used by
element filterable_psm_annotations
attributes
Name  Type  Use  Default  Fixed  Annotation
search_program  xs:string  required      
documentation
The name of the search program, must be found in the search_programs element
annotation_name  xs:string  required      
documentation
The name of the psm annotation type (e.g., "q-value"). Must be found in the possible score types for the above search program
value  xs:decimal  required      
documentation
The value (ie, score) assigned for the given annotationtype from the given search program
annotation
documentation
A numeric annotation (usually a score) assigned to a peptide spectrum match (PSM) that is meant to describe the quality of the match and may be used to filter out poor matches. Examples include p-value, q-value, XCorr
source <xs:element name="filterable_psm_annotation">
 
<xs:annotation>
   
<xs:documentation>A numeric annotation (usually a score) assigned to a peptide spectrum match (PSM) that is meant to describe the quality of the match and may be used to filter out poor matches. Examples include p-value, q-value, XCorr</xs:documentation>
 
</xs:annotation>
 
<xs:complexType>
   
<xs:attribute name="search_program" type="xs:string" use="required">
     
<xs:annotation>
       
<xs:documentation>The name of the search program, must be found in the search_programs element</xs:documentation>
     
</xs:annotation>
   
</xs:attribute>
   
<xs:attribute name="annotation_name" type="xs:string" use="required">
     
<xs:annotation>
       
<xs:documentation>The name of the psm annotation type (e.g., "q-value"). Must be found in the possible score types for the above search program</xs:documentation>
     
</xs:annotation>
   
</xs:attribute>
   
<xs:attribute name="value" type="xs:decimal" use="required">
     
<xs:annotation>
       
<xs:documentation>The value (ie, score) assigned for the given annotationtype from the given search program</xs:documentation>
     
</xs:annotation>
   
</xs:attribute>
 
</xs:complexType>
</xs:element>

attribute filterable_psm_annotation/@search_program
type xs:string
properties
use required
annotation
documentation
The name of the search program, must be found in the search_programs element
source <xs:attribute name="search_program" type="xs:string" use="required">
 
<xs:annotation>
   
<xs:documentation>The name of the search program, must be found in the search_programs element</xs:documentation>
 
</xs:annotation>
</xs:attribute>

attribute filterable_psm_annotation/@annotation_name
type xs:string
properties
use required
annotation
documentation
The name of the psm annotation type (e.g., "q-value"). Must be found in the possible score types for the above search program
source <xs:attribute name="annotation_name" type="xs:string" use="required">
 
<xs:annotation>
   
<xs:documentation>The name of the psm annotation type (e.g., "q-value"). Must be found in the possible score types for the above search program</xs:documentation>
 
</xs:annotation>
</xs:attribute>

attribute filterable_psm_annotation/@value
type xs:decimal
properties
use required
annotation
documentation
The value (ie, score) assigned for the given annotationtype from the given search program
source <xs:attribute name="value" type="xs:decimal" use="required">
 
<xs:annotation>
   
<xs:documentation>The value (ie, score) assigned for the given annotationtype from the given search program</xs:documentation>
 
</xs:annotation>
</xs:attribute>


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