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View Structure Prediction Details

Protein: CB60C_ARATH
Organism: Arabidopsis thaliana
Length: 622 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CB60C_ARATH.

Description E-value Query
Range
Subject
Range
CB60B_ARATH - Calmodulin-binding protein 60 B OS=Arabidopsis thaliana GN=CBP60B PE=2 SV=1
988.0 [0..9] [615..7]
gi|50924552, gi|... - gi|50924552|ref|XP_472636.1| OSJNBa0058G03.4 [Oryza sativa (japonica cultivar-group)], gi|32482927|e...
908.0 [0..2] [619..4]
gi|7489107, gi|1... - pir||T03793 calmodulin-binding protein TCB60 - common tobacco, gi|1698548|gb|AAB37246.1| calmodulin...
825.0 [0..109] [620..16]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTRYMERTN SMREKRKLEE DDNQQQQQQP ERKRPALASV IVEALKMDSL QRLCSSLEPI  60
   61 LRRVVSEEVE RALAKLGPAR LSERSSPKRI EGIG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRNLQLQFRS RLSVPLFTGG KIEGEQGAAI HVVLLDMTTG HVLTVGPEAS AKLDVVVLDG  60
   61 DFNTEDDDGW SGEEFEGHLV KERQGKRPLL TGDVQVTLKE GVGTLGELIF TDNSSWIRCR 120
  121 KFRLGLRVSS GYCEGMRVRE AKTEAFTVKD HRGELYKKHY P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [256-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PALDDEVWRL EKIGKDGAFH KKLNKAGIYN VKEFLRLMVK DSQKLRTILG SGMSNRMWET  60
   61 LAEHSKTCVL SEMLYVYYPE DSVGVVFNNI YEFSGLISGK QYYPADSLSD NQKGYVDGLV 120
  121 RKAYENWEQV IEYDSKSLMN FN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [398-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVSKTDDIDY SMPVSVPSQP STSYSDVTVE AYNQSPASSF PGQSQLADTT YMHFGNSSFA  60
   61 PQDQLVNNTH ESQSMINSNG GVRLALGPAT GSQNQEQLVH PPPEI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [503-622]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSYNDWSNTC NRGVDGFLSE EEIRARSNEM LENDDMQQLL RLFSMNGGDQ QTPLNMGEDS  60
   61 FGFHSFGQTS MADYEEDRSN SGKAVVGWLK IKAAMRWGFF IRRKAAQRRA QIVQLDEDDE 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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