| Protein: | gi|42569224 |
| Organism: | Arabidopsis thaliana |
| Length: | 640 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42569224.
| Description | E-value | Query Range |
Subject Range |
|
|
521.0 | [0..1] | [640..1] |
|
|
457.0 | [0..24] | [615..32] |
|
|
368.0 | [0..141] | [635..111] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MLLHCNVSYY TSTFSFISSS LRRQDNADDS QDTVIRRRHN ARSISLYIRH NRDLKLNKNP 60
61 NESQETFVPP PPPPRRDL
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.820 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.790 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.734 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.706 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.686 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.639 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.604 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.595 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.544 | d.58.12 | eEF-1beta-like |
|
Region A: Residues: [79-176] |
1 11 21 31 41 51
| | | | | |
1 DGENRSKLLE LSLVTRRTPQ FPGSIYAQSA SDADIASSLP SLRNFLGSDG DDDGESEREM 60
61 IVKALEIRRK VTKEIIKESL VRKGRFGITY ATNVTDRL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.714 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.665 | N/A | N/A | d.70.1 | Yest killer toxins |
| View | Download | 0.665 | N/A | N/A | d.70.1 | Yest killer toxins |
| View | Download | 0.651 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.651 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.628 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.628 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.608 | N/A | N/A | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.588 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.559 | N/A | N/A | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.476 | N/A | N/A | d.58.48 | MTH1187-like |
| View | Download | 0.382 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.357 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.317 | N/A | N/A | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
|
Region A: Residues: [177-275] |
1 11 21 31 41 51
| | | | | |
1 GDFVDHVMIQ AAALKRLPEF SESRFNLRAR TVIEDSNFVP LVRWLKHHEL SYNRIAKIIC 60
61 MSKGNLDSIR IMIEWLKSIH VKGEFIAVAF LRSGDNILQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.870 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.794 | a.74.1 | Cyclin-like |
| View | Download | 0.794 | a.74.1 | Cyclin-like |
| View | Download | 0.793 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.789 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.789 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.758 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.718 | a.39.1 | EF-hand |
|
Region A: Residues: [276-453] |
1 11 21 31 41 51
| | | | | |
1 RNREELNEIV EYLESNGVRR DWMGYVVGRC PELLSFSMEE VKSRVDFFLK MGMNQNDFGT 60
61 MVYDYPKIIG FFSFQVMEKK INYLKEFGLS TEEVGRLLAY KPHLMGCSIE ERWKPLVKYF 120
121 YYLGIPKEGM KRILVVKPIL YCIDLEKTIA PKVRFLQEMG IPNEAIGNML VKFPSLLT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [454-640] |
1 11 21 31 41 51
| | | | | |
1 NSLYKKIRPV IFLLTRAGVT QKDIGKVIAM DPALLGCSIG TKLEPNMRYY ISLGIRFYQL 60
61 GEMIADFPML LRYNVDNLRP KYRYLRRTMI RPLQDLIEFP RFFSYSLERR IIPRHTIMVE 120
121 NRVNFKLRYM LACTDEEFER RVRDKVERRE RFEAGLDSED SQPSDENISD QEIAFSDEAE 180
181 EEEDLTE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
