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Protein Overview: gi|42569224

General Information:
Name(s) found: gi|42569224 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|42569224|ref|NP_179763.2| EMB2219 (EMBRYO DEFECTIVE 2219); transferase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 640 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLHCNVSYY TSTFSFISSS LRRQDNADDS QDTVIRRRHN ARSISLYIRH NRDLKLNKNP  60
   61 NESQETFVPP PPPPRRDLDG ENRSKLLELS LVTRRTPQFP GSIYAQSASD ADIASSLPSL 120
  121 RNFLGSDGDD DGESEREMIV KALEIRRKVT KEIIKESLVR KGRFGITYAT NVTDRLGDFV 180
  181 DHVMIQAAAL KRLPEFSESR FNLRARTVIE DSNFVPLVRW LKHHELSYNR IAKIICMSKG 240
  241 NLDSIRIMIE WLKSIHVKGE FIAVAFLRSG DNILQRNREE LNEIVEYLES NGVRRDWMGY 300
  301 VVGRCPELLS FSMEEVKSRV DFFLKMGMNQ NDFGTMVYDY PKIIGFFSFQ VMEKKINYLK 360
  361 EFGLSTEEVG RLLAYKPHLM GCSIEERWKP LVKYFYYLGI PKEGMKRILV VKPILYCIDL 420
  421 EKTIAPKVRF LQEMGIPNEA IGNMLVKFPS LLTNSLYKKI RPVIFLLTRA GVTQKDIGKV 480
  481 IAMDPALLGC SIGTKLEPNM RYYISLGIRF YQLGEMIADF PMLLRYNVDN LRPKYRYLRR 540
  541 TMIRPLQDLI EFPRFFSYSL ERRIIPRHTI MVENRVNFKL RYMLACTDEE FERRVRDKVE 600
  601 RRERFEAGLD SEDSQPSDEN ISDQEIAFSD EAEEEEDLTE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [79..176] MSA 2.017988 View MSA. No confident structure predictions are available.
    3 View Details [177..275] deduced N/A Confident ab initio structure predictions are available.
    4 View Details [276..453] MSA 5.132991 View MSA. No confident structure predictions are available.
    5 View Details [454..640] MSA 6.130992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle