| Protein: | gi|42569224 |
| Organism: | Arabidopsis thaliana |
| Length: | 640 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42569224.
| Description | E-value | Query Range |
Subject Range |
|
|
521.0 | [0..1] | [640..1] |
|
|
457.0 | [0..24] | [615..32] |
|
|
368.0 | [0..141] | [635..111] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MLLHCNVSYY TSTFSFISSS LRRQDNADDS QDTVIRRRHN ARSISLYIRH NRDLKLNKNP 60
61 NESQETFVPP PPPPRRDL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.820 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
|
Region A: Residues: [79-176] |
1 11 21 31 41 51
| | | | | |
1 DGENRSKLLE LSLVTRRTPQ FPGSIYAQSA SDADIASSLP SLRNFLGSDG DDDGESEREM 60
61 IVKALEIRRK VTKEIIKESL VRKGRFGITY ATNVTDRL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [177-275] |
1 11 21 31 41 51
| | | | | |
1 GDFVDHVMIQ AAALKRLPEF SESRFNLRAR TVIEDSNFVP LVRWLKHHEL SYNRIAKIIC 60
61 MSKGNLDSIR IMIEWLKSIH VKGEFIAVAF LRSGDNILQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.870 | a.60.9 | lambda integrase-like, N-terminal domain |
|
Region A: Residues: [276-453] |
1 11 21 31 41 51
| | | | | |
1 RNREELNEIV EYLESNGVRR DWMGYVVGRC PELLSFSMEE VKSRVDFFLK MGMNQNDFGT 60
61 MVYDYPKIIG FFSFQVMEKK INYLKEFGLS TEEVGRLLAY KPHLMGCSIE ERWKPLVKYF 120
121 YYLGIPKEGM KRILVVKPIL YCIDLEKTIA PKVRFLQEMG IPNEAIGNML VKFPSLLT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [454-640] |
1 11 21 31 41 51
| | | | | |
1 NSLYKKIRPV IFLLTRAGVT QKDIGKVIAM DPALLGCSIG TKLEPNMRYY ISLGIRFYQL 60
61 GEMIADFPML LRYNVDNLRP KYRYLRRTMI RPLQDLIEFP RFFSYSLERR IIPRHTIMVE 120
121 NRVNFKLRYM LACTDEEFER RVRDKVERRE RFEAGLDSED SQPSDENISD QEIAFSDEAE 180
181 EEEDLTE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
