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View Structure Prediction Details

Protein: ARI7_ARATH
Organism: Arabidopsis thaliana
Length: 562 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARI7_ARATH.

Description E-value Query
Range
Subject
Range
ARI5_ARATH - Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana GN=ARI5 PE=2 SV=1
458.0 [0..19] [561..16]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSEEDMLDA HDMESGEDDF YSGGTDDCND SDDGEPDYGF VEEDADDSAM IASHRSQKNF  60
   61 CVLREEDIRR HQMDNIERVS VVLSITEVEA SILLRHFHWS VGRVHDEW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [109-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FADEERVRKT VGILESHVVP PSDDSELTCG ICFDSYPPEK IASVSCGHPF CTTCWTGYIS  60
   61 TTINDGPGCL MLRCPDPSCL AAVGHDMVDK LASEDEKEKY NRYFLRSYIE DNRKMKWCPA 120
  121 PGCDFAIDFV AGSGNYDVSC LCSFSFCWNC TEEAHRPVDC STVSKWILKN SAESENMNWI 180
  181 LANSKPCPRC KRPIEKNQGC MHMTCTPPCK YEFCWLCLGA WMDHGERTGG FYAC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.0
Match: 2i13A
Description: No description for 2i13A was found.

Predicted Domain #3
Region A:
Residues: [343-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRYEVAKQEG QYDETERRRE MAKNSLERYT HYYERWASNQ TSRQKAMADL QQAQMQNLEK  60
   61 LSDKQCTPES QLKFILEAWL QIIECRRVLK WTYAYGYYLP EHEHAKRQFF EYLQGEAESG 120
  121 LERLHQCVEK DLVQFLIAEG PSKDFNDFRT KLAGLTSVTK NYFENLVKAL ENGLADVDSH 180
  181 AACSSKSTSS KSTGCSSKTR GKGKGSSRTG GSSRNPDDNL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle