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View Structure Prediction Details

Protein: NUD14_ARATH
Organism: Arabidopsis thaliana
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUD14_ARATH.

Description E-value Query
Range
Subject
Range
gi|4586103, gi|7... - pir||T06605 hypothetical protein F16J13.50 - Arabidopsis thaliana, gi|7267899|emb|CAB78241.1| putati...
239.0 [0..1] [309..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFTLLPSR LLAFPSRALP RRLHHHHAKL ILRCKMSSSS SSLTQSITLP SQPNEPVLVS  60
   61 ATAGISSSDF RDAIDSSLFR NWLRNLESES GI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LADGSMTLKQ VLIQGVDMFG KRIGFLKFKA DIFDKETGQK VPGIVFARGP AVAVLILLES  60
   61 DGETYAVLTE QVRVPTGKIV LELPAGMLDD DKGDFVGTAV REVEEEIGIK LKKEDMVDLT 120
  121 AFLDPSTGYR IFPSPGGCDE EMSVFLYRGQ VEKETIRQLQ GKETGLREHG EFIKVRLIPY 180
  181 RELWRKTADA KVLMSIGLYE MAQREGLVSS QRLKPNS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1g0sA
Description: ADP-ribose pyrophosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.960699420760702 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle