| Protein: | gi|52076947, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 651 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52076947, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
393.0 | [0..10] | [618..1] |
|
|
323.0 | [0..40] | [631..41] |
|
|
307.0 | [0..30] | [572..30] |
|
Region A: Residues: [1-229] |
1 11 21 31 41 51
| | | | | |
1 MATATATAAL ALLSPPLPAS PTPPPPPPLR AILLKQPFLR PIRQRRRLSP RPLLRRRDPV 60
61 AACAPTADAE TASTSRSYDA LEAERAVAEL LREHGASPAD AASIAARAPG YAAMLADGVR 120
121 ELDELGLWES WSSGAGAGRE VEMAGLGFGR KVYYMGKAKS RRDRGVVPLL ESVGVRLSSA 180
181 KLIAPYVSAA GLPVLIDRIK FLKEILFSSN VYETLISRNA KRMMMHLSI
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [230-341] |
1 11 21 31 41 51
| | | | | |
1 PADESLQSTL SFFEKMEARY GGLNMLGHGD VSFPYLIESF PMLLLCSENN HLKPLIDFLQ 60
61 YIGIPKPRIA SVLLSFPPII LSDVENDIKP RINAWEKVGI EQEYIGRMLL KY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.443 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.442 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.415 | N/A | N/A | a.213.1 | Description not found. |
| View | Download | 0.397 | N/A | N/A | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.384 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.384 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.379 | N/A | N/A | d.20.1 | UBC-like |
| View | Download | 0.376 | N/A | N/A | a.158.1 | F-box domain |
| View | Download | 0.362 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.361 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
|
Region A: Residues: [342-471] |
1 11 21 31 41 51
| | | | | |
1 PWILSTCVLE NYGQMLMFFQ RRKISSTVLG VAMRSWPHIL GCSTKRMNSI VELFDDLGIS 60
61 KKMLVPVVTS SPQLLLRKPN EVMQIILFFK DMGLDKKTVA KILCRSPEIF ASSVENTLKK 120
121 KINFLIDFGV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.615 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.615 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.582 | d.79.5 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |
| View | Download | 0.580 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.520 | d.79.5 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |
| View | Download | 0.511 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.499 | d.79.5 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |
| View | Download | 0.499 | d.79.5 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |
| View | Download | 0.494 | d.79.5 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |
|
Region A: Residues: [472-651] |
1 11 21 31 41 51
| | | | | |
1 PKHYLPRIIR KYPELLLLDI NRTMLPSSCE HVTDFNSSMY SNVYRINYLL DMGLSKKNVC 60
61 SMIYRFSPLL GYSIELVMKP KLEFLLRTMK KPLKAVVEYP RYFSYSLEGR IKPRFCVLQS 120
121 RKIDCSLTDM LAKNDELFAE EYLGVGRSLE TDIQSSEAAC FHMRKSTSAV LKHCEGLEYR 180
181
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
