| Protein: | gi|30698494, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1017 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30698494, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
1073.0 | [0..1] | [1017..1] |
|
|
1071.0 | [0..1] | [948..1] |
|
|
1066.0 | [0..1] | [1017..1] |
|
|
1066.0 | [0..35] | [1017..1] |
|
|
1055.0 | [0..7] | [1017..22] |
|
|
1053.0 | [0..117] | [1017..138] |
|
|
1049.0 | [0..161] | [1017..8] |
|
|
1044.0 | [0..1] | [1017..1] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MPSSPTPATA PISCSPSPPL HLHLTARRQT LAPPMWRRLP ARRLASALLS SSAPLPHPLH 60
61 RSLLLLLPAA SQRLAPSQTL PRFASSSAAV AAESVSSEEV DELHHAIGEI ARGDPSVSAP 120
121 APAAGQEGHR RRSGRGKHSA EAMAVP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [147-1017] |
1 11 21 31 41 51
| | | | | |
1 AAGQEGHRRR SGRGKHSAEA MAVHGVGYHK YAMLRRRQIQ IETEAWEQAA EEYRELLADM 60
61 CQQKLAPNLP YVKSLFLGWF EPLRDQIIAE QELVGERGAR ASHARYFNML PADMMAVITM 120
121 HKLMGLLMTG SGDGSVRVIQ AACQIGEAIE HEVRIHKFLE KTKKKSNKEM DNEEEGGDSD 180
181 IAKEQERLRK KVTDLMKKQK IRQVRNIVKK QDNSKPWGQD AHAKVGSRLI ELMIETAYIQ 240
241 PPASQSADGP PDIRPAFTHE MRTVAREQQK SSRRYGVIKC DPLVRQGLDR TAKHMVIPYM 300
301 PMLIPPISWT GYDKGAHLFL PSYVMRTHGA RQQRDAVRRA PREQMQSVFE ALNTLGSTKW 360
361 RVNKRVLSIV DRIWSSGGRL ADLVDRTDVA LPEKPDTEDE DKLKKWRWTL RAAKKENSER 420
421 HSQRCDVELK LAVARKMKDE DGFYYPHNLD FRGRAYPMHP YLNHLGSDLC RGVLEFAEGR 480
481 PLGKSGLRWL KIHLANLYAG GVDKLSYDGR IAFTENHLED IFDSADRPLE GKRWWLGAED 540
541 PFQCLAVCIN LTEALRSPSP ETMISHIPVH QDGSCNGLQH YAALGRDKLG AIAVNLVAGE 600
601 KPADVYTGIA TRVVEIMKND ALKDPATDPD AARARLLLDQ VDRKLVKQTV MTSVYGVTYV 660
661 GAREQIKRRL KERDMICDDS ELFSASCYAA KVTLTALGEM FQAARSIMNW LGDCAKVIAC 720
721 ENEPVRWTTP LGLPVVQPYR KLGRHLIKTS LQVLTLQRET DKVMVKRQRT AFPPNFVHSL 780
781 DGSHMMMTAV ACKRQGLNFA GVHDSYWTHA CDVDTMNKIL REKFVELYDT PILENLLESF 840
841 EKSFPELKFP PLPERGDFDL TDVLGSPYFF N
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1cezA |
| Description: | T7 RNA polymerase |
Matching Structure (courtesy of the PDB): |
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