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Protein Overview: gi|30698494, gi|...

General Information:
Name(s) found: gi|37360973 [NCBI NR]
gi|30698494 [NCBI NR]
gi|115478128 [NCBI NR]
gi|113630892 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type single subunit RNA polymerase [Oryza sativa Japonica Group] [NCBI NR]
  • gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115478128|ref|NP_001062659.1| Os09g0246200 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1017 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSPTPATA PISCSPSPPL HLHLTARRQT LAPPMWRRLP ARRLASALLS SSAPLPHPLH  60
   61 RSLLLLLPAA SQRLAPSQTL PRFASSSAAV AAESVSSEEV DELHHAIGEI ARGDPSVSAP 120
  121 APAAGQEGHR RRSGRGKHSA EAMAVPAAGQ EGHRRRSGRG KHSAEAMAVH GVGYHKYAML 180
  181 RRRQIQIETE AWEQAAEEYR ELLADMCQQK LAPNLPYVKS LFLGWFEPLR DQIIAEQELV 240
  241 GERGARASHA RYFNMLPADM MAVITMHKLM GLLMTGSGDG SVRVIQAACQ IGEAIEHEVR 300
  301 IHKFLEKTKK KSNKEMDNEE EGGDSDIAKE QERLRKKVTD LMKKQKIRQV RNIVKKQDNS 360
  361 KPWGQDAHAK VGSRLIELMI ETAYIQPPAS QSADGPPDIR PAFTHEMRTV AREQQKSSRR 420
  421 YGVIKCDPLV RQGLDRTAKH MVIPYMPMLI PPISWTGYDK GAHLFLPSYV MRTHGARQQR 480
  481 DAVRRAPREQ MQSVFEALNT LGSTKWRVNK RVLSIVDRIW SSGGRLADLV DRTDVALPEK 540
  541 PDTEDEDKLK KWRWTLRAAK KENSERHSQR CDVELKLAVA RKMKDEDGFY YPHNLDFRGR 600
  601 AYPMHPYLNH LGSDLCRGVL EFAEGRPLGK SGLRWLKIHL ANLYAGGVDK LSYDGRIAFT 660
  661 ENHLEDIFDS ADRPLEGKRW WLGAEDPFQC LAVCINLTEA LRSPSPETMI SHIPVHQDGS 720
  721 CNGLQHYAAL GRDKLGAIAV NLVAGEKPAD VYTGIATRVV EIMKNDALKD PATDPDAARA 780
  781 RLLLDQVDRK LVKQTVMTSV YGVTYVGARE QIKRRLKERD MICDDSELFS ASCYAAKVTL 840
  841 TALGEMFQAA RSIMNWLGDC AKVIACENEP VRWTTPLGLP VVQPYRKLGR HLIKTSLQVL 900
  901 TLQRETDKVM VKRQRTAFPP NFVHSLDGSH MMMTAVACKR QGLNFAGVHD SYWTHACDVD 960
  961 TMNKILREKF VELYDTPILE NLLESFEKSF PELKFPPLPE RGDFDLTDVL GSPYFFN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] MSA 5.266997 View MSA. No confident structure predictions are available.
    2 View Details [147..1017] PSI-BLAST 1000.0 T7 RNA polymerase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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