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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30698494, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSPTPATA PISCSPSPPL HLHLTARRQT LAPPMWRRLP ARRLASALLS SSAPLPHPLH  60
   61 RSLLLLLPAA SQRLAPSQTL PRFASSSAAV AAESVSSEEV DELHHAIGEI ARGDPSVSAP 120
  121 APAAGQEGHR RRSGRGKHSA EAMAVPAAGQ EGHRRRSGRG KHSAEAMAVH GVGYHKYAML 180
  181 RRRQIQIETE AWEQAAEEYR ELLADMCQQK LAPNLPYVKS LFLGWFEPLR DQIIAEQELV 240
  241 GERGARASHA RYFNMLPADM MAVITMHKLM GLLMTGSGDG SVRVIQAACQ IGEAIEHEVR 300
  301 IHKFLEKTKK KSNKEMDNEE EGGDSDIAKE QERLRKKVTD LMKKQKIRQV RNIVKKQDNS 360
  361 KPWGQDAHAK VGSRLIELMI ETAYIQPPAS QSADGPPDIR PAFTHEMRTV AREQQKSSRR 420
  421 YGVIKCDPLV RQGLDRTAKH MVIPYMPMLI PPISWTGYDK GAHLFLPSYV MRTHGARQQR 480
  481 DAVRRAPREQ MQSVFEALNT LGSTKWRVNK RVLSIVDRIW SSGGRLADLV DRTDVALPEK 540
  541 PDTEDEDKLK KWRWTLRAAK KENSERHSQR CDVELKLAVA RKMKDEDGFY YPHNLDFRGR 600
  601 AYPMHPYLNH LGSDLCRGVL EFAEGRPLGK SGLRWLKIHL ANLYAGGVDK LSYDGRIAFT 660
  661 ENHLEDIFDS ADRPLEGKRW WLGAEDPFQC LAVCINLTEA LRSPSPETMI SHIPVHQDGS 720
  721 CNGLQHYAAL GRDKLGAIAV NLVAGEKPAD VYTGIATRVV EIMKNDALKD PATDPDAARA 780
  781 RLLLDQVDRK LVKQTVMTSV YGVTYVGARE QIKRRLKERD MICDDSELFS ASCYAAKVTL 840
  841 TALGEMFQAA RSIMNWLGDC AKVIACENEP VRWTTPLGLP VVQPYRKLGR HLIKTSLQVL 900
  901 TLQRETDKVM VKRQRTAFPP NFVHSLDGSH MMMTAVACKR QGLNFAGVHD SYWTHACDVD 960
  961 TMNKILREKF VELYDTPILE NLLESFEKSF PELKFPPLPE RGDFDLTDVL GSPYFFN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle