| Protein: | gi|15237439, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 333 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15237439, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
336.0 | [0..1] | [333..1] |
|
|
228.0 | [0..25] | [332..1] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MADVENLNSV PASEDTEYGF KRPEMYSTNI ANSITSYARH VFVLYKTPEA WLSHVEEEGL 60
61 PQRFATLLKD RKSDLLVQTK L
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.475 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.342 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.334 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.325 | N/A | N/A | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.287 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.286 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.275 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.229 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.216 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.211 | N/A | N/A | b.114.1 | N-utilization substance G protein NusG, insert domain |
|
Region A: Residues: [82-238] |
1 11 21 31 41 51
| | | | | |
1 NVCEGGGSDG DVLIFPDMIR YKGVKDTDVE GFFEDVLVNG KPWSSGIQEE ISGTFVFVCT 60
61 HASRDKRCGV CGPVILERFK QEIGSRGLSD QITLKRCSHV GQHKYAGNLI IFCPDSAGKI 120
121 TGNWYGYVTP DDVPELLDQH IAKGEIIQRI WRGQMGL
|
| Detection Method: | |
| Confidence: | 13.154902 |
| Match: | 2fug2 |
| Description: | Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [239-333] |
1 11 21 31 41 51
| | | | | |
1 PGGEAEKVHE QKVIPNGHGV VKEESKGFTG GCCQGSNGVS CCQDETPKPE PIKKEVKKCT 60
61 IWFQPLDKEE LYIGAAVVGA IATIAMAFTF FKRSG
|
| Detection Method: | |
| Confidence: | 10.221849 |
| Match: | 2fug1 |
| Description: | Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus |
| Matching Structure (courtesy of the PDB): |
|
