| Protein: | JMJ30_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 429 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JMJ30_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
416.0 | [0..1] | [429..1] |
|
|
371.0 | [0..15] | [420..22] |
|
|
370.0 | [0..15] | [420..22] |
|
|
369.0 | [0..9] | [420..2] |
|
|
368.0 | [0..9] | [420..2] |
|
|
366.0 | [0..15] | [420..22] |
|
|
353.0 | [0..9] | [420..2] |
|
|
339.0 | [0..15] | [420..11] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MSGATTASSG DHNNLRLPTP TLDAESQTLL QSISAEGGYA YARMAVLAVA GDQSAAEAAR 60
61 DMAWEQLHSG PWHSVLPVWR DAYSMACLHV AKIHFAAGEF GEALGALDMG LIMGGMLLRK 120
121 DLHDSVLLVS SEARKMTKSL EEAS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.954 | a.118.8 | TPR-like |
|
Region A: Residues: [145-429] |
1 11 21 31 41 51
| | | | | |
1 GDFKGERLVP EVPVDVNEVR HVLANLQLLV LKILPCRSLT CKRVEKRSGL SLEGFLRDYY 60
61 LPGTPVVITN SMAHWPARTK WNHLDYLNAV AGNRTVPVEV GKNYLCSDWK QELVTFSKFL 120
121 ERMRTNKSSP MEPTYLAQHP LFDQINELRD DICIPDYCFV GGGELQSLNA WFGPAGTVTP 180
181 LHHDPHHNIL AQVVGKKYIR LYPSFLQDEL YPYSETMLCN SSQVDLDNID ETEFPKAMEL 240
241 EFMDCILEEG EMLYIPPKWW HYVRSLTMSL SVSFWWSNEA ESSSS
|
| Detection Method: | |
| Confidence: | 41.522879 |
| Match: | 1mzeA |
| Description: | Hypoxia-inducible factor HIF ihhibitor (FIH1) |
Matching Structure (courtesy of the PDB): |
|
