| Protein: | gi|10178126, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 617 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10178126, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
471.0 | [0..6] | [617..16] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 MFYSHQLLAR KAPLGQIWMA ATLHAKINRK KLDKLDIIQI CEEILNPSVP MALRLSGILM 60
61 GGVVIVYERK VKLLFDDVNR FLVEINGAWR TKSVPDPTLL PKGKTHARKE AVTLPENEEA 120
121 DFGDFEQTRN VPKFGNYMDF QQTFISMRLD ESHVNNNPEP EDLGQQF
|
| Detection Method: |  |
| Confidence: | 44.070581 |
| Match: | PF04825.4 |
| Description: | No description for PF04825.4 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [168-406] |
1 11 21 31 41 51
| | | | | |
1 HQADAENITL FEYHGSFQTN NETYDRFERF DIEGDDETQM NSNPREGAEI PTTLIPSPPR 60
61 HHDIPEGVNP TSPQRQEQQE NRRDGFAEQM EEQNIPDKEE HDRPQPAKKR ARKTATSAMD 120
121 YEQTIIAGHV YQSWLQDTSD ILCRGEKRKV RGTIRPDMES FKRANMPPTQ LFEKDSSYPP 180
181 QLYQLWSKNT QVLQTSSSES RHPDLRAEQS PGFVQERMHN HHQTDHHERS DTSSQNLDS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [407-528] |
1 11 21 31 41 51
| | | | | |
1 PAEILRTVRT GKGASVESMM AGSRASPETI NRQAADINVT PFYSGDDVRS MPSTPSARGA 60
61 ASINNIEISS KSRMPNRKRP NSSPRRGLEP VAEERPWEHR EYEFEFSMLP EKRFTADKEI 120
121 LF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [529-617] |
1 11 21 31 41 51
| | | | | |
1 ETASTQTQKP VCNQSDEMIT DSIKSHLKTH FETPGAPQVE SLNKLAVGMD RNAAAKLFFQ 60
61 SCVLATRGVI KVNQAEPYGD ILIARGPNM
|
| Detection Method: | |
| Confidence: | 10.39794 |
| Match: | 1w1wE |
| Description: | Sc Smc1hd:Scc1-C complex, ATPgS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
