YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|7494192
Organism: Plasmodium falciparum
Length: 699 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494192.

Description E-value Query
Range
Subject
Range
gi|16660617 - gi|16660617|gb|AAL27607.1|AF429950_1 PDZ domain protein [Plasmodium falciparum]
467.0 [0..1] [699..1]
gi|56498868 - gi|56498868|emb|CAH95898.1| PDZ domain protein, putative [Plasmodium berghei]
gi|68072989 - gi|68072989|ref|XP_678409.1| PDZ domain protein [Plasmodium berghei strain ANKA]
327.0 [0..250] [697..155]
gi|83282447 - gi|83282447|ref|XP_729775.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23488518 - gi|23488518|gb|EAA21340.1| PDZ domain protein [Plasmodium yoelii yoelii]
327.0 [0..194] [697..115]
gi|70942414 - gi|70942414|ref|XP_741376.1| PDZ domain protein [Plasmodium chabaudi chabaudi]
gi|56519717 - gi|56519717|emb|CAH78195.1| PDZ domain protein, putative [Plasmodium chabaudi chabaudi]
183.0 [0..237] [555..155]
gi|124505617, gi... - gi|23510226|ref|NP_702892.1| Plasmodium falciparum trophozoite antigen r45-like protein [Plasmodium ...
166.0 [0..6] [418..462]

Back

Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLLMSKFLV WIIIFGNFFV VHFFLCFKIP NNKITNVLTY DNSKKQRINS KHNTFLYKND  60
   61 TLNKLLNRKK NKHTLFYRSK KEKDIQESGY LYPFDHLEKK KTKFPPDPYI PSEDEKESSI 120
  121 DIFHDKINDD DLMIYEDDDD AKKYFGKTTF NKPNIIQKDE NSEDDQDDDL NDQNDDPINN 180
  181 PTNNLTDNPT NNSTDNPTNN SIDNPTNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [209-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIDNPTNNSI DNPTNNSIDN PTNNSIDNPT NNSIDNPTNN STDNPINSPN YQQVTQSNII  60
   61 LEEENNTNKT DIEKDIININ FYSSEEKKIA CEMIKDQIYY LLHSSMDKTF IETFNINIES 120
  121 HIVPSEKRIC VSYNMKSHTF KRSISNLSDL IEFSNKLKYV LDERIHKLYY EDKNNENAYL 180
  181 NKTLRKELEI GKKERDVTNL SKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [412-602]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLQMSIESSL KLIEKCMQNM YKQNYEITLH DLKLAYNMLP CKYYGFFLSN LCSTISTLSY  60
   61 YVNDLQGTFN FALKSIKYEP KYNVAWKCLG DAYRSFRKFW QAKNFYDIAI YLGYKDEKGE 120
  121 RFEDIVQELN NLTENALKNV DLLKEHMNNS TNIIIKKNIG IVLNKNPDSI GGCYVSYIIE 180
  181 GSKASKKNLH H

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [603-699]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDQIVALNNH VTYGKPIDFC LKAFQKNDGT YDIIFFKGNI IELYGLKAYK YLMKNDLFYA  60
   61 LFENEQIVSF KRNETILFDM KGFGTFSEYG MSKAEFV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle