| Protein: | IP5P3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 664 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IP5P3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
572.0 | [0..1] | [664..1] |
|
|
459.0 | [0..10] | [657..50] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MSPVEPAGIM KKSHRQKSQR LWAKLVMRKW LNISGRDPEY GADTDNESEN EDAREDNDDS 60
61 SSDEEGGSGS RGRESKVYEN AEDAIAAASA VVDAAAAA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.487 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.487 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.273 | a.60.8 | HRDC-like |
| View | Download | 0.269 | a.60.14 | Description not found. |
| View | Download | 0.246 | a.29.8 | Description not found. |
| View | Download | 0.245 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.221 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.202 | c.114.1 | YchN-like |
|
Region A: Residues: [99-307] |
1 11 21 31 41 51
| | | | | |
1 AEFISNDAPM KLRRRNSETL RAQYINNKEI RVCVGTWNVG GISPPSDLDI DDWIEINQPA 60
61 DIYVLGLQEI VPLNAGNILG AEDDRPVAKW EEVIREALNR VRPKLSGVKS YSDPPSPGRF 120
121 KPFEETHDII EEEVAFESDS DAGVEIHPID EEEEEETDRL WALKHDGGVI GEVKTLVDPN 180
181 TGLPVVEIKR QFSIPKKLDR QLCLRADSF
|
| Detection Method: | |
| Confidence: | 3.0 |
| Match: | 1i9yA |
| Description: | Synaptojanin, IPP5C domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [308-664] |
1 11 21 31 41 51
| | | | | |
1 KGISDDDSTQ TGMKTINRML SGKERIGLSW PEPPLNMLGP CVLDRQPSIK TVKSLKTAKS 60
61 FKAYSSFKSV AGNNNGIPPE VLALAEMDLK LLMERKRRPA YVRLVSKQMV GILLTIWVKR 120
121 SLRKHIQNVR VSTVGVGVMG YIGNKGAVSV SMSINQTFFC FINTHLTAGE REVDQIKRNA 180
181 DVHEIHKRTV FHSVSALGLP KLIYDHERII WLGDLNYRLS SSYEKTRDLI SKREWSKLLE 240
241 YDQLVKEYRK GRAFDGWSEG TLHFPPTYKY QANSDEYTAN DGKAPKRTPA WCDRVLSYGK 300
301 GMRLVHYRRT EQKFSDHRPV TAIYMAEVEV FSARKLQRAL TFTDAEIEDE GLVAVLV
|
| Detection Method: | |
| Confidence: | 84.69897 |
| Match: | 1i9yA |
| Description: | Synaptojanin, IPP5C domain |
| Matching Structure (courtesy of the PDB): |
|
