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Protein Overview: gi|113533603, gi...

General Information:
Name(s) found: gi|115439585 [NCBI NR]
gi|113533603 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|115439585|ref|NP_001044072.1| Os01g0716800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113533603|dbj|BAF05986.1| Os01g0716800 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 676 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGASSTSAS ARATPPARSL PPLGASGSQQ EPAATASHHA AGAGASSRPM RRKGRKQKQL  60
   61 WPKTVLRKWL NIRSPESDFS ADEGEATGDD DTDSEFEYEE MCHWERQLYD EERRLRGLGA 120
  121 ETIDSQMEGA PYKLNRRRKS ETLRAQYIDI KELRVCVGTW NVAGRLPPDD LDIQDWLDME 180
  181 EPADIYVLGF QEIVPLNAGN IFGAEDNRPV AMWEHIIRET LNKISPDKPK YKCHSDPPSP 240
  241 SRFKPSDDVE DELVSESDSE SGGEVHPWNE QDFTVDDDSV HSNKYEHSTS GPTETTVNGN 300
  301 NFSRVPSMKI FDRSHNLSFK DYVSSLEEPI HQKMLTKTLS YSERLGMIWP EQPLDILAQR 360
  361 LPDSTKPFIS EKALRSCLSF KSAHGDSNAF PDDCLVHDFN IKSALVKTKR PYFVRIISKQ 420
  421 MVGVFISIWV RRSLRKHIQN LKVSTVGVGA MGYIGNKGSI AVSMSIYQTL FCFICCHLTS 480
  481 GEKDGDELKR NADVQEIHRR TIFNPVSRVS MPKTIYDHER IIWLGDLNYR INLSYEKTHE 540
  541 FISMKDWNGL FQNDQLKREF KKGHLFDGWT EGVISFPPTY KYKVNSEKYT SDEPKSGRRT 600
  601 PAWCDRILSF GKGMRLQAYR TVDIRLSDHR PVTAVYTSDV EVFCPKKLQR ALTFTDAEVE 660
  661 DQFSFEEEST SGIFSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] MSA 29.076994 View MSA. No confident structure predictions are available.
    2 View Details [129..336] FFAS03 5.08 Synaptojanin, IPP5C domain
    3 View Details [337..676] PSI-BLAST 92.69897 Synaptojanin, IPP5C domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.1002470406706 bayes_pls_golite062009
  • hydrolase activity
    		•  0.543079625092675 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.315746147208237 bayes_pls_golite062009
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.23505510330573 bayes_pls_golite062009
  • hydrolase activity
    		•  0.79070010643157 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.71596812518333 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle