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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113533603, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGASSTSAS ARATPPARSL PPLGASGSQQ EPAATASHHA AGAGASSRPM RRKGRKQKQL  60
   61 WPKTVLRKWL NIRSPESDFS ADEGEATGDD DTDSEFEYEE MCHWERQLYD EERRLRGLGA 120
  121 ETIDSQMEGA PYKLNRRRKS ETLRAQYIDI KELRVCVGTW NVAGRLPPDD LDIQDWLDME 180
  181 EPADIYVLGF QEIVPLNAGN IFGAEDNRPV AMWEHIIRET LNKISPDKPK YKCHSDPPSP 240
  241 SRFKPSDDVE DELVSESDSE SGGEVHPWNE QDFTVDDDSV HSNKYEHSTS GPTETTVNGN 300
  301 NFSRVPSMKI FDRSHNLSFK DYVSSLEEPI HQKMLTKTLS YSERLGMIWP EQPLDILAQR 360
  361 LPDSTKPFIS EKALRSCLSF KSAHGDSNAF PDDCLVHDFN IKSALVKTKR PYFVRIISKQ 420
  421 MVGVFISIWV RRSLRKHIQN LKVSTVGVGA MGYIGNKGSI AVSMSIYQTL FCFICCHLTS 480
  481 GEKDGDELKR NADVQEIHRR TIFNPVSRVS MPKTIYDHER IIWLGDLNYR INLSYEKTHE 540
  541 FISMKDWNGL FQNDQLKREF KKGHLFDGWT EGVISFPPTY KYKVNSEKYT SDEPKSGRRT 600
  601 PAWCDRILSF GKGMRLQAYR TVDIRLSDHR PVTAVYTSDV EVFCPKKLQR ALTFTDAEVE 660
  661 DQFSFEEEST SGIFSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle